New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	Exported	75303 =	NA (NA)	0 (0.000) +TCTTCTCTTCTCTTCTCTTCTCTTC	5/104	4.3	NA	intergenic (‑44/‑1050)	BCHEFKBB_00065/BCHEFKBB_00066	Opacity protein opA54 [NGO_11100]/peptidase A8 [NGO_0071]
	?	Exported	= 2038034	NA (NA)					intergenic (‑43/+432)	BCHEFKBB_02086/pilE	Opacity protein opA54 [NGO_11100]/Fimbrial protein
Rejected: Coverage evenness skew score above cutoff.

AACCGGTTAAACCGAATAAGGAGCCGAAAATGAATCCAGCCCGCAAAAAACCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  Exported/75397‑75303 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGCAGCGCAGGCGGCAAGTGAAGGCAATGGCCGCGGCCCGTATGTGCAGGCGGATTTAGCCTACGCCGCCGAACGCATTACCCACGATTATCCGGAACCAACCGCTCCAGGCAAAAACAAAATAAGCACGGTAAGCGATTATTTCAGAAA  <  Exported/2038034‑2037885                                                                                                |||||||||||||||||||||||||                                                                                                                                                       AACCGGTTAAACCGAATAAGGAGCCGAAAATGAATCCAGCCCGCAAAAAACCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCGGCAGCGCAGGCGGCAAGTGAAGGCAATGGC                                                                                                                         <  1:854940/151‑1        TAAACCGAATAAGGAGCCGAAACTGAATCCAGCCCGCAAAAAACCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCGTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCGGCAGCGCAGGCGGCAAGTGAAGGCAATGGCCGCGGCC                                                                                                                  <  2:1366502/151‑1        TAAACCGAATAAGGAGCCGAAAATGAATCCAGCCCGCAAAAAACCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTACTCTTCTCTTCTCTACGGCAGCGCAGGCGGCAAGTGAAGGCAATGGCCGCGGCC                                                                                                                  <  2:1366507/151‑1               AATAAGGAGCCGAAAATGAATCCAGCCCGCAAAAAACCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCGGCAGCGCAGGCGGCAAGTGAAGGCAATGGCCGCGGCCCGTATG                                                                                                            <  1:611090/150‑1                aaAAGGAGCCGAAAATGAATCCAGCCCGCAACAAACCTTCTCTTCTCTTCTCTTCTCGTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCGGCAGCGCAGGCGGCAAGTGAAGGCAATGGCCGCGGCCCGTATGTG                                                                                                          <  2:710692/149‑1                             AATGAATCCAGCCCGCAAAAAACCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCGGCAGCGCAGGCGGCAAGTGAAGGCAATGGCCGCGGCCCGTATGTGCAGGCGGATTTAG                                                                                             >  2:795692/1‑151                                                                                                                     CTTCGGCAGCGCAGGCGGCAAGTGAAGGCAATGGCCGCGGCCCGTATGTGCAGGCGGATTTAGCCTACGCCGCCGAACGCATTACCCACGATTATCCGGAACCAACCGCTCCAGGCAAAAATAAAATAAGCACGGTAAGCGATTATTTCAG     >  1:1349677/1‑151                                                                                                                     CTTCGGCAGCGCAGGCGGCAAGTGAAGGCAATGGCCGCGGCCCGTATGTGCAGGCGGATTTAGCCTACGCCGCCGAACGCATTACCCACGATTATCCGGAACCAACCGCTCCAGGCAAAAATAAAATAAGCACGGTAAGCGATTATTTCAG     >  1:1349717/1‑151                                                                                                                     CTTCGGCAGCGCAGGCGGCAAGTGAAGGCAATGGCCGCGGCCCGTATGTGCAGGCGGATTTAGCCTACGCCGCCGAACGCATTACCCACGATTATCCGGAACCAACCGCTCCAGGCAAAAATAAAATAAGCACGGTAAGCGATTATTTCAG     >  1:1349721/1‑151                                                                                                                     CTTCGGCAGCGCAGGCGGCAAGTGAAGGCAATGGCCGCGGCCCGTATGTGCAGGCGGATTTAGCCTACGCCGCCGAACGCATTACCCACGATTATCCGGAACCAACCGCTCCAGGCAAAAACAAAATAAGCACGGTAAGCGATTATTTCAG     >  2:893033/1‑151                                                                                                                      TTCGGCAGCGCAGGCGGCAAGTGAAGGCAATGGCCGCGGCCCGTATGTGCAGGCGGATTTAGCCTACGCCGCCGAACGCATTACCCACGATTATCCGGAACCAACCGCTCCAGGCAAAAACAAAATAAGCACGGTAAGCGATTATTTCAGA    <  1:716834/151‑1                                                                                                                       TCGGCAGCGCAGGCGGCAAGTGAAGGCAATGGCCGCGGCCCGTATGTGCAGGCGGATTTAGCCTACGCCGCCGAACGCATTACCCACGATTATCCGGAACCAACCGCTCCAGGCAAAAACAAAATAAGCACGGTAAGCGATTATTTCAGAA   <  2:1278388/151‑1                                                                                                                       TCGGCAGCGCAGGCGGCAAGTGAAGGCAATGGCCGCGGCCCGTATGTGCAGGCGGATTTAGCCTACGCCGCCGAACGCATTACCCACGATTATCCGGAACCAACCGCTCCAGGCAAAAACAAAATAAGCACGGTAAGCGATTATTTCAGAA   <  2:631651/151‑1                                                                                                                        CGGCAGCGCAGGCGGCAAGTGAAGGCAATGGCCGCGGCCCGTATGTGCAGGCGGATTTAGCCTACGCCGCCGAACGCATTACCCACGATTATCCGGAACCAACCGCTCCAGGCAAAAACAAAATAAGCACGGTAAGCGATTATTTCAGAAA  >  1:1165766/1‑151                                                                                                |||||||||||||||||||||||||                                                                                                                                                       AACCGGTTAAACCGAATAAGGAGCCGAAAATGAATCCAGCCCGCAAAAAACCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  Exported/75397‑75303 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGCAGCGCAGGCGGCAAGTGAAGGCAATGGCCGCGGCCCGTATGTGCAGGCGGATTTAGCCTACGCCGCCGAACGCATTACCCACGATTATCCGGAACCAACCGCTCCAGGCAAAAACAAAATAAGCACGGTAAGCGATTATTTCAGAAA  <  Exported/2038034‑2037885

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.