| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | Exported | 1,831,990 | 0 | G | A | 38.0% | 191.4 / 291.6 | 239 | intergenic (‑123/+230) | BCHEFKBB_01881/BCHEFKBB_01882 | Opacity protein opA54 [NGO_09965]/transposase [NGO_09970] |
| Reads supporting (aligned to +/- strand): ref base G (102/45); new base A (61/29); total (165/74) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.85e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.73e-01 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 257 total aligned reads displayed.
GGCGTAAGCCAGATCCGCCTGCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGGCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTATTAAAAAGATTGTTAATAAACGCCAAGTATTTTATCAGATTTGTTTTGCCGGGATATGATTTGTTTTGTTAAAGAATGTATTTATTTTTTAAAATCCCGGCCAGCCGGGAT > Exported/1831844‑1832140 | ggCGTAAGCCAGATCCGCCTGCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGACCGt > 1:407352/1‑151 (MQ=255) gCGTAAGCCAGATCCGCCTGCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGACCGTa > 2:968104/1‑151 (MQ=255) tAAGCCAGTTCCGCCTGCACATCCGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGACGACAAGAGAAGAGAAGAGAAGAGAAGAGAAGCGAAGAGAAGTTTCTGGTCGGCCGTATGc < 2:1216760/151‑1 (MQ=14) tAAGCCAGATCCGCCTGCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGGCCGTATGc < 1:1025391/151‑1 (MQ=255) tAAGCCAGATCCGCCTGCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGGCCGTATGc < 1:684636/151‑1 (MQ=255) tAAGCCAGATCCGCCTGCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGGCCGTATGc < 1:1259882/151‑1 (MQ=255) tAAGCCAGATCCGCCTGCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGACCGTATGc < 1:865979/151‑1 (MQ=255) tAAGCCAGATCCGCCTGCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGACCGTATGc < 2:585180/151‑1 (MQ=255) tAAGCCAGATCCGCCTGCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAACAGAAGAGAAGTTTTTTGTCGACCGTATGc < 2:452760/151‑1 (MQ=255) tAAGCCAGATCCGCCAGCACATACGGGCCGCGCCGATGGTCTTCACCCGCCGCCCGCGCTGCGTAAGAGAAGAGAAGATAAGAGAAGAGTAGAGTAGAGAAGAGAAGAGAAGAGAAGAGAAGTGAAGAGAAGTTTTTTGTCGGCCGTATGc < 1:997230/151‑1 (MQ=14) aaaGCCAGATCCGCCTGCACATACGGGCCGCGCCCATGGTCGTCACCCGCCGCCCGCGCTGGGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGTAGAGAAGAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGGCCGTATGc < 2:1132598/150‑1 (MQ=255) aGCCAGATCCGCCTGCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGGCCGTATGCat > 1:572633/1‑151 (MQ=255) aGCCAGATCCGCCTGCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGACCggaggcat > 2:725395/1‑144 (MQ=255) aGCCAGATCCGCCTGCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGACCGTATGCat > 2:941097/1‑151 (MQ=255) aGCCAGATCCGCCTGCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGACCGTATGCat > 1:209001/1‑151 (MQ=255) aGCCAGATCCGCCTGCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGACCGTATGCat > 2:1259900/1‑151 (MQ=255) ccAGATCCGCCTGCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGACCGTATGCata < 2:502309/150‑1 (MQ=255) aTCCGCCTGCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGTAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGACGAGAAGTTTTTTGTCGACCGTATGCATATCAAc < 1:941441/151‑1 (MQ=255) aTCCGCCTGCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGGCCGTATGCATATc < 1:1642/148‑1 (MQ=255) aTCCGCCTGCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGACCGTATGCATATc < 2:392904/148‑1 (MQ=255) aTCCGCCTGCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGACCGTATGCATATCAAc < 1:53247/151‑1 (MQ=255) aTCCGCCTGCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGACCGTATGCATATCAAc < 1:461182/151‑1 (MQ=255) tGCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGGCCg < 1:988569/131‑1 (MQ=255) tGCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGGCCGTATGCATATCAACTCCGAat > 1:596449/1‑151 (MQ=255) gCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGACGAGAAGAGAAGAGAAGAGAAGAGAAGAGTCGAGAAGAGAAGAGTAGTTTTTTGTCGACCGTATGCATATCGACGCCGAata > 2:1227553/1‑151 (MQ=11) gCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGGCCGTATGc < 1:626221/135‑1 (MQ=255) gCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGGCCGTATGCATATCAACTCCGAata > 2:149135/1‑151 (MQ=255) gCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGGCCGTATGCATATCAACTCCGAata > 1:247238/1‑151 (MQ=255) cagcaTACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGGCCGTATGCATATCAACTCCGAata > 1:320556/4‑151 (MQ=255) cacaTACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGACGTTTTTTGTCGGCCGTATTCATATCAACTCCGaaaat > 2:847202/1‑148 (MQ=255) caTACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGACGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGACCGTATGCATATCAACTCCGAatattt > 1:1227112/1‑149 (MQ=255) caTACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGACGAGAAGAGAAGAGAAGTTTTTTGTCGACCGTATGCatat < 2:1164543/136‑1 (MQ=255) caTACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGGCCGTATGCATATCAACTCCGAatat > 2:86229/1‑149 (MQ=255) caTACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGACCGTATGCatat > 1:1164991/1‑136 (MQ=255) caTACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGACCGTATGCATATCAACTCCGAatattt > 1:1069221/1‑149 (MQ=255) caTACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGACCGTATGCATATCAAATCCGAatattt > 1:346149/1‑149 (MQ=255) caTACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGTGTTTTGTCGACCGTATGCATATCAACTCCGAatattt > 1:1555068/1‑149 (MQ=255) caTACGGGCCGCGCCCAGGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGTCTTTTATTGTCGAACGGATGCATATCAACGACGAatattt > 2:1540624/1‑149 (MQ=11) caTACGGGCCGAGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAACAGAAGAGAACAGAAGTTTTTTGTCGACCGTATGCATATCAACTCCGAatattt < 2:465200/151‑3 (MQ=14) cGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGGCCGTATGCATATCAACTCCGAATATCTAAGa < 1:49112/151‑1 (MQ=255) ggCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGTGAAGAGAAGAGAAGAGACGAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGGCCGTAGGCATATCAACTCCGTATATCTAAGAtt > 1:1481941/1‑151 (MQ=17) ggCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGGCCGTATGCATATCAACTCCGAATATCTAAGAtt > 1:1396268/1‑151 (MQ=255) ggCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGGCCGTATGCATATCAACTCCGAATATCTAAGAtt > 2:690764/1‑151 (MQ=255) ggCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGACCGTATGCATATCAACTCCGAATATTTAAGAtt > 1:391029/1‑151 (MQ=255) ggCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGACCGTATGCATATCAAATCCGAATATTTAATAtt > 1:60315/1‑151 (MQ=14) ggCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGTGATTTGGCGGCCGGATGCATCGCAACTCCGCTAATCTAAGAtt > 2:911948/1‑151 (MQ=14) cgcCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGGCCGTATGCATATCAACTCCGAATATCTAAGATTAAatt > 1:102695/1‑151 (MQ=255) cccATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGACCGTATGCATATCAACTCCGAATATTTAAGATTAAatt > 2:1457865/1‑149 (MQ=255) gTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAGGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGGCCGTCAGCCTATCCACTCCGAATCTCTAAGATTAAATTATTaaaaa > 1:1344469/1‑151 (MQ=17) gTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGACGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGACCGTATGCATATCAACTCCGAATATTTAAGATTAAATTATTaaaag > 2:497222/1‑150 (MQ=255) gTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAATAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGTTTTTTGTCTGCCGTATTCAAATCAACTACTAATATAAAAGATTAAATTATTaaaaa > 2:375915/1‑151 (MQ=14) gTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGGGAAGAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGGCCGTATGCATATCAACTCCGAATATCAAAGATTAAATTATTaaaaa > 1:181572/1‑151 (MQ=255) gTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGTAGTTTTTTGTCTACCGTATGCATATCAACTCCGAATATTTAAGATTAAATTATTaaaag > 1:1273569/1‑150 (MQ=11) gTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGTTTTTTTTCGGCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTATTaaaaa > 1:1306202/1‑151 (MQ=255) gTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGGCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTATTaaata > 2:1281236/1‑149 (MQ=255) gTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGGCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTATTaaaaa > 2:245938/1‑151 (MQ=255) gTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGACCGTATTCATATAAACTCCGAATATTTAAGATTAAATTATTaaaag > 1:725057/1‑150 (MQ=14) gTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGACCGTATGCATATCAACTc < 1:95029/123‑1 (MQ=255) gTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGACCGTATGCATATCAACTCCGAATATTTAAGATTAAATTATTaaaag > 1:170368/1‑150 (MQ=255) gTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGACCGTATGCATATCAACTCCGAATATTTAAGATTAAATTATTaaaag > 1:249599/1‑150 (MQ=255) tCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGACCGTATGCATATCAACTCCGAATATTTAAGATTAAATTATTaaaaga < 2:1355893/151‑3 (MQ=255) cgcccgcGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGGCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTATTAAAAAGATTTTtaataa > 2:772169/1‑151 (MQ=255) gaagagaagagaagagaagagaagagaagagaagagaagagaagagaatagaagagaagagaagaGAAGTTTTTTGTCGGCCGTAAGCATATAAAATCCGAATATCTAATATTAAATTATTAAAAAGATTTTTAATAAAAGCCAAGTAttt > 1:749091/1‑151 (MQ=14) gaagagaagagaagagaagagaagagaagagaagagaagagaagagaagagaagagaagagaagaGAAGTTTTTTGTCGGCCGTATGCATATCAACTCCGAATATATAATATTAAATTATTAAAAAGATTGTTAATAAACGCCAAGAAttt > 1:1267297/1‑151 (MQ=255) gaagagaagagaagagaagagaagagaagagaagagaagagaagagaagagaagagaagagaagTTTTTTGTCGGCCGTATGCATATCAACTCCGAAAATCTAAGATTAAATTATTAAAAAGATAGTTAATAAACGCCAAGTAATTTAtaa > 2:1405944/1‑149 (MQ=255) gaagagaagagaagagaagagaagagaagagaagagaagagaagagaagagaagagaagagaagTTTTTTGTCGGCCGTATGCATATCAACTACGAATATCTAATATTAAATTATTAAAAAGATTGTTAATAAACGCCAAGTATTTTATCa > 2:139522/1‑151 (MQ=255) aagtgaagagaagagaagagaagagaagagacgagaagagcagagatgagcagagaagagaagTTTTTTGTCGGCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTATTAAAAAGATTGTTAATAAACGCCAAGTATTTTATc < 1:1250379/145‑1 (MQ=14) aagagaagagcagagaagagaagagaagagacgagaagagaagagcagagaagagaagcgaagTTTTTGGTCGGCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTATTAAAAAGATTGTTAATAAACGCCAAGTATTTTATc < 2:441810/149‑1 (MQ=14) gaagagaagagaagagaagagaagagaagagaagagaagagaagagaagagaagagaagTTTTTTGTCGGCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTATTAAAAATATTGTTAATAAACGCCAAGTATTTTATCAGAttt > 2:165942/1‑151 (MQ=255) gagaagagaagagaagagaagagaagagaagagaagagaagagaagagaagagaagTTTTTTGTCGGCCGTATGCATATCAACTCCGAATATATAAGATTAAATTATTAAAAAGATTGTTAATAAAAGACAAGTATTTTATAAGATTTGtt > 2:120104/1‑151 (MQ=14) aagagaagagacgagaagagacgagaagagaagagaagagaagagacgagaagTTTTTTGTCGGCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTATTAAAAAGATTGTTAATAAACGCCAAGTATTTTATCAGATTTGttt < 1:1089430/149‑1 (MQ=255) gagaagagaagagaagagaagagaagagaagagaagagaagagaagagaagTTTTTTGTCGGCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTATTAAAAATATTTTTAATAAACGCCAAGTAt > 2:574564/1‑131 (MQ=255) gagaagagaagagaagagaagagaagagaagagaagagaagagaagagaagTTTTTTGTCGGCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTATTAAAAAGATTGTTAATAAACGCCAAGTATTTTATCAGATTTGTTTTGc > 2:1445502/1‑150 (MQ=255) gagaagagaagagaagagaagagaagagaagagaagagaagagaagTTTTTTGTCGGCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTATTAAAAAGATTGTTAATAAACGCCAAGTATTTTATCAGATTTGTTTTGCCGGGat > 1:763702/1‑151 (MQ=255) gaagagaagagaagagaagagaagagaagagaagagaagagaagTTTTTTGTCGGCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTATTAAAAAGATTTTTAATAAACGCCAAGTATTTTATCAGATTTGTTTTGCCGGGatat > 1:1453037/1‑151 (MQ=255) gagaagagaagagaagagaagagaagagaagagaagagaagTTTTTTGTCGGCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTATTAAAAAGATTGTTATTTATCGCGATGGATTTTATGAGATTTGTTTTGGCgggtgttgat > 2:1388748/1‑144 (MQ=14) agaagagaagagcagataagagaagagaagagaagagaagTTTTTTGTCGGCCGTATGCATATCAACTCAGAATATCTAAGATTAAATTATTAAAAAGATTGTTAATAAACGCCAAGTATTTTATCAGATTTGTTTTGCCGGGATATGAt < 1:86262/150‑1 (MQ=255) agaagagaagagaagagaagagaagagaagacaagagaagTTTTTTGTCGGCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTATTAAAAAGATTGTTAATAAACGCCAAGTATTTTATCAGATTTGTTTTGCCGGGATATGa < 2:1100375/149‑1 (MQ=255) gagaagagaagagaagagaagagaagagaagagaagTTTTTTGTCGGCCGTATGCATATCAACACCGAATATCTAAGATTAAATTATTAAAAAGATTGTTAATAAACGCCAAGTATTTTATCAGATTTGTTTTTCCGGGATATGAtttgtt > 1:20991/1‑151 (MQ=255) cgacgcgacgagcagagaagagaagagacgagaagTTTTTTGTCGGCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTATTAAAAAGATTGTTAATAAACGCCAAGTATTTTATCAGATTTGTTTTGCCGGGATATGAtttgttt < 2:610122/138‑1 (MQ=14) aagagaagagaagagacgagaagagaagagaagTTTTTTGTCGGCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTATTAAAAAGATTGTTAATAAACGCCAAGTATTTTATCAGATTTGTTTTGCCGGGATATGAtttgttt < 2:644558/149‑1 (MQ=255) gaagagaagagaagagaagagaagagaagTTTTTTGTCGGCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTATTAAAAAGATTGTTAATAAACGCCAAGTATTTTATCAGATTTGTTTTTCCGGGATATGATTTGTTTTGTTaa > 2:1502748/1‑151 (MQ=255) gagaagagaagagaagagaagagaagTTTTTTGTCGGCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTATTAAAAAGATTGTTAATAAACGCCAAGTATTTTATCAGATTTGTTTTGCCGGGATATGATTTGTTTTGTTAAAGa > 2:163750/1‑151 (MQ=255) gagaagagaagagaagagaagagaagTTTTTTGTCGGCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTATTAAAAAGATTGTTAATAAACGCCAAGTATTTTATCAGATTTGTTTTGACGGGATATGATTTGTTTTGTTAAAGa > 2:330635/1‑151 (MQ=255) agaagagcagagaagagaagagaagTTTTTTGTCGGCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTATTAAAAAGATTGTTAATAAACGCCAAGTATTTTATCAGATTTGTTTTGCCGGGATATGATTTGTTTTGTTAAAg < 1:1494970/149‑1 (MQ=255) aagagaagagaagagaagagaagTATTTTGTCGGCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTATTAAAAAGATTGTTAATAAACGCCAAGTATTTTATCAGATTTGTTTTGCCGGGATATGATTTGTTTTGTTAAAGaa < 1:376964/149‑1 (MQ=255) gagaagagaagagaagagaagTTTTTTGTCGGCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTATTAAAAAGATTGTTAATAAACGCCAAGTATTTTATCAGATTTGTTTTGCCGGGATATGATTTGTTTTGTTAAAGAATGta > 2:1479722/1‑151 (MQ=255) gaagagaagagaagagaagTTTTTTGTCGGCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTATTAAAAAGATTGTTAATAAACGCCAAGTATTTTATCAGATTTGTTTTGCCGGGATATGATTTGTTTTGTTAAAGAATGtatt > 1:1129400/1‑151 (MQ=255) gaagagaagagaagagaagTTTTTTGTCGGCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTATTAAAAAGATTGTTAATAAACGCCAAGTATTTTATCAGATTTGTTTTGCCGGGATATGATTTGTTTTGTTAAAGAATGtatt > 2:1085988/1‑151 (MQ=255) aagagaagagaagagaagTTTTTTGTCGGCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTATTAAAAAGATTGTTAATAAACGCCAAGTATTTTATCAGATTTGTTTTGCCGGGATATGATTTGTTTTGTTAAAGAATGtatt < 1:1209/150‑1 (MQ=255) gagaagagaagagaagTTTTTTGTCGGCCGTATTCAAATCAACTCCGAATATCTAATATTAAAATATTAAAAAGATTGTTAATAAACGCCAAGTATTTTATAAGATTTGTTTTGCCGGGATATGATTTGTTTTGTTAAATAATGgatttat > 1:1433743/1‑151 (MQ=14) gaagagaagagaagTTTTTTGTCGGCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTATTAAAAAGATTGTTAATAAACGCCAAGTATTTTATCAGATTTGTTTTTCCGGGATATGATTTGTTTTGTTAAATAATGTatttattt > 1:625035/1‑151 (MQ=255) gCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTATTAAAAAGATTGTTAATAAACGCCAAGTATTTTATCAGATTTGTTTTGCCGGGATATGATTTGTTTTGTTCAAGAATGTATTTATTTTTTAAAATCCCGGCCAGCCGGGAt > 1:788033/1‑151 (MQ=255) gCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTATTAAAAAGATTGTTAATAAACGCCAAGTATTTTATCAGATTTGTTTTGCCGGGATATGATTTGTTTTGTTAAAGAATGTATTTATTTTTTAAAATCCCGGCCAGCCGGGAt > 1:90172/1‑151 (MQ=255) gCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTATTAAAAAGATTGTTAATAAACGCCAAGTATTTTATCAGATTTGTTTTGCCGGGATATGATTTGTTTTGTTAAAGAATGTATTTATTTTTTAAAATCCCGGCCAGCCGGGAt > 1:107497/1‑151 (MQ=255) gCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTATTAAAAAGATTGTTAATAAACGCCAAGTATTTTATCAGATTTGTTTTGCCGGGATATGATTTGTTTTGTTAAAGAATGTATTTATTTTTTAAAATCCCGGCCAGCCGGGAt > 2:11090/1‑151 (MQ=255) gCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTATTAAAAAGATTGTTAATAAACGCCAAGTATTTTATCAGATTTGTTTTGCCGGGATATGATTTGTTTTGTTAAAGAATGTATTTATTTTTTAAAATCCCGGCCAGCCGGGAt > 1:549566/1‑151 (MQ=255) gCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTATTAAAAAGATTGTTAATAAACGCCAAGTATTTTATCAGATTTGTTTTGCCGGGATATGATTTGTTTTGTTAAAGAATGTATTTATTTTTTAAAATCCCGGCCAGCCGGGAt > 1:1373012/1‑151 (MQ=255) gCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTATTAAAAAGATTGTTAATAAACGCCAAGTATTTTATCAGATTTGTTTTGCCGGGATATGATTTGTTTTGTTAAAGAATGTATTTATTTTTTAAAATCCCGGCCAGCCGGGAt > 2:1372108/1‑151 (MQ=255) gCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTATTAAAAAGATTGTTAATAAACGCCAAGTATTTTATCAGATTTGTTTTGCCGGGATATGATTTGTTTTGTTAAAGAATGTATTTATTTTTTAAAATCCCGGCCAGCCGGGAt > 2:307247/1‑151 (MQ=255) | GGCGTAAGCCAGATCCGCCTGCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGGCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTATTAAAAAGATTGTTAATAAACGCCAAGTATTTTATCAGATTTGTTTTGCCGGGATATGATTTGTTTTGTTAAAGAATGTATTTATTTTTTAAAATCCCGGCCAGCCGGGAT > Exported/1831844‑1832140 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |