| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | = 260158 | 191 (0.930) | 43 (0.230) +ATTCCCGCCTGCGC |
20/264 | 6.0 | 19.0% | intergenic (+258/+217) | BCHEFKBB_00257/BCHEFKBB_00258 | ligand‑gated channel [NGO_1495]/N‑(5'‑phosphoribosyl)anthranilate isomerase[NGO_0261] |
| ? | Exported | = 1888008 | 215 (1.040) | intergenic (‑391/+190) | BCHEFKBB_01931/BCHEFKBB_01932 | GIY‑YIG nuclease [NGO_1911]/pilus assembly protein [NGO_10270] | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ATCCGGACATTCAATGCTAAGGCAATTTATCGGAAATGACTGAAACTCAAAAAACCGGATTCCCACTTTCGTGGGAATGACGCGATTAGAGTTTCAAAATTTATTCTAAATAGCTGAAGCTCAATGAACCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/260027‑260158‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGGAATGACGAAGTGGAAGTTACCCGAAACTTAAAACAAGCGAAACCGAACGAACCGGATTCCCA‑TTGTCGTGGAAATGACGGGATTTTAGGTTTCTGATTTTGGTTTTCTGTTTTTGTAGGAATGATGAAATTTTGAGTTTTAGGA < Exported/1888008‑1887862 |||||||||||||| atcaaGACATTCAATACTAAGGCAATTTATCGGGAATGACTGAAACTCAAAAAACCGGATTCCCACTTTCGTGGGAATGACGGGATTAGAGTTTCAAAAGTTATTCTAAATAGCTGAAACTCAACGCACCGGATTCCCGCCTGCGCGGGAA < 1:33067/146‑1 CATTCAATACTAAGGCAATTTATCGGGAATGACTGAAACTCAAAAAACCGGATTCCCACTTTCGTGGGAATGACGGGATTAGAGTTTCAAAAGTTATTCTAAATAGCTGAAACTCAACGCACCGGATTCCCGCCTGCGCGGGAATGACGAA > 1:117640/1‑151 CATTCAATACTAAGGCAATTTATCGGGAATGACTGAAACTCAAAAAACCGGATTCCCACTTTCGTGGGAATGACGGGATTAGAGTTTCAAAAGTTATTCTAAATAGCTGAAACTCAACGCACCGGATTCCCGCCTGCGCGGGAATGACGAA > 1:117647/1‑151 ATTCAATACTAAGGCAATTTATCGGGAATGACTGAAACTCAAAAAACCGGATTCCCACTTTCGTGGGAATGACGGGATTAGAGTTTCAAAAGTTATTCTAAATAGCTGAAACTCAACGCCCCGGATTCCCGCCTGCGCGGGAATGACGAAt > 1:1656938/1‑150 ataCTAAGGCAATTTATCGGGAATGACTGAAACTCAAAAAACCGGATTCCCACTTTCGTGGGAATGACGGGATTAGAGTTTCAAAAGTTATTCTAAATAGCTGAAACTCAACGCACCGGATTCCCGCCTGCGCGGGTATGGAGAAGTGGAA > 2:1075393/4‑151 ataCTAAGGCAATTTATCGGGAATGACTGAAACTCAAAAAACCGGATTCCCACTTTCGTGGGAATGACGGGATTAGAGTTTCAAAAGTTATTCTAAATAGCTGAAACTCAACGCACCGGATTCCCGCCTGCGAGGGAATGACGAAGTGGAA > 1:1321176/4‑151 CTAAGGCAATTTATCGGGAATGACTGAAACTCAAAAAACCGGATTCCCACTTTCGTGGGAATGACGGGATTAGAGTTTCAAAAGTTATTCTAAATAGCTGAAACTCAACGCACCGGATTCCCGCCTGCGCGGGAATGACGAAGTGGAAGTT < 2:865476/151‑1 ATCGGGAATGACTGAAACTCAAAAAACCGGATTCCCACTTTCGTGGGAATGACGGGATTAGAGTTTCAAAAGTTATTCTAAATAGCTGAAACTCAACGCACCGGATTCCCGCCTGCGCGGGAATGACGAAGTGGAAGTTACCCGAAACTTt > 1:1627745/1‑150 cgAATGACTGAAACTCAAAAAACCGGATTCCCACTTTCGTGTGAATGACGGGATTAGAGTTACAAAAGTTATTCTAAATAGCTGAAACTCAACGCACCGGATTCCCGCCTGCGCGGGAATGACGAAGTGGAAGTTATCCGAAACTTAAAAC < 2:681122/149‑1 GACTGAAACTCAAAAAACCGGATTCCCACTTTCGTGGGAATGACGGGATTAGAGTTTCAAAAGTTATTCTAAATAGCTGAAACTCAACGCACCGGATTCCCGCCTGCGCGGGAATGACGAAGTGGAAGTTACCCGAAACTTAAAACAAGCG > 2:868967/1‑151 GACTGAAACTCAAAAAACCGGATTCCCACTTTCGTGGGAATGACGGGATTAGAGTTTCAAAAGTTATTCTAAATAGCTGAAACTCAACGCACCGGATTCCCGCCTGCGCGGGAATGACGAAGTGGAAGTTACCCGAAACTTAAAACAAGCG > 2:57447/1‑151 ACTGAAACTCAACAATCCTGATTCCCACGTTCGTGGGAATGACGTGATTAGAGTTTCAAAAGTTCTTCTAAATAGCTGAAACTCAACGCACCGGATTCCCGCCTGCGCGGGAATGACGAAGTGGAAGTTACCCGAAACTTAAAACAAGCG < 1:1482283/150‑1 ACTGAAACTCAAAAAACCGGATTCCCACTTTCGTGGGAATGACGGGATTAGAGTTTCAAAAGTTATTCTAAATAGCTGAAACTCAACGCACCGGATTCCCGCCTGCGCGGGAATGACGAAGTGGAAGTTACCCGAAACTTAAAACAAGCG < 2:117597/150‑1 ACTGAAACTCAAAAAACCGGATTCCCACTTTCGTGGGAATGACGGGATTAGAGTTTCAAAAGTTATTCTAAATAGCTGAAACTCAACGCACCGGATTCCCGCCTGCGCGGGAATGACGAAGTGGAAGTTACCCGAAACTTAAAACAAGCG < 2:117604/150‑1 AAACTAAAAAAACCTGATTCCCACTTTCGTGGGAATGACGGGATTAGAGTTTAAAAAGTTATTCTAAATAGCTGAAACTCAACGCACCGGATTCCCGCCTGCGCGGGAATGACGAAGTGGAAGTTACCCGAAACTTAAAACAAGCGAAAC < 2:1658585/150‑1 aacCCGGATTCCCACTTTCGTGGTAATGACGGTATTAGAGTTTCAAAAGTTATTCTAAATAGCTGAAACTCAACGCACCGGATTCCCGCCTGCGCGGGAATGACGAAGTGGAAGTTACCCGAAACTTAAAACAAGCGAAACCGAACGAACC < 2:1420601/148‑1 GATTCCCACTTTCGTGGGAATGACGGGATTAGAGTTTCAAAAGTTATTCTAAATAGCTGAAACTCAACGCACCGGATTCCCGCCTGCGCGGGAATGACGAAGTGGAAGTTACCCGAAACTTATAACAAGCGAAACCGAACGAACCGGATTg > 2:1655978/1‑150 GATTCCCACTTTCGTGGGAATGACGGGATTAGAGTTTCAAAAGTTATTCTAAATAGCTGAAACTCAACGCACCGGATTCCCGCCTGCGCGGGAATGACGAAGTGGAAGTTACCCGAAACTTAAAACAAGAGAAACCGAACGAACCGGATT > 1:1597053/1‑150 GATTCCCACTTTCGTGGGAATGACGGGATTAGAGTTTCAAAAGTTATTCTAAATAGCTGAAACTCAACGCACCGGATTCCCGCCTGAGCGGGAATGACGAAGTGGAAGTTACCCGAAACTGATAACAAGCGAAACAGAACGAACCGGATT > 2:1655996/1‑150 CCCACTTTCGTGGGAATGACGCGATTAGCGTTTCAACAGTTATTCTAAATAGCTGAACCTCAACGCACCGGAGTCCCGCCTGCGCGGGAATGACGAAGTGGAAGTTACCCGAAACTTAAAACAAGCGAAACCGAACGAACCGGATTCCCAc < 2:1317627/151‑2 CCCACGTTCGTGGGAATGACGGTATTAGAGTTTCAAAATTTATTCTAAATAGCTGAAACTCAACGCACCGGATTCCCGCCTGCGCGGGAATGACGAAGTGGAAGTTACCCGAAACTTAAAACAAGCGAAACCGAACGAACCGGATTCCCAc < 2:1317622/151‑2 GAATGACGGGATTAGAGTTTCAAAAGTTATTCTAAATAGCTGAAACTCAACGCACCGGATTCCCGCCTGCGCGGGAATGACGAAGTGGAAGTTACCCGAAACTTAAAACAAGCGAAACCGACCGAACCGGAGTCCCccggtcgtgggcatg > 1:70756/1‑136 AATGACGGGATTAGAGTTTCAAAAGTTATTCTAAATAGCTGAAACTCAACGCACCGGATTCCCGCCTGCGCGGGAATGACGAAGTGGAAGTTACCCGAAACTTAAAACAAGCGAAACCGAACGAACCGGATTCCCAc < 1:263814/137‑2 AATGACGGGATTAGAGTTTCAAAAGTTATTCTAAATAGCTGAAACTCAACGCACCGGATTCCCGCCTGCGCGGGAATGACGAAGTGGAAGTTACCCGAAACTTAAAACAAGCGAAACCGAACGAACCGGATTCCCAc > 2:263728/1‑136 gGATTAGAGTTTCAAAAGTTATTCTAAATAGCTGAAACTCAACGCACCGGATTCCCGCCTGCGCGGGAATGACGAAGTGGGAGTTACCCGATACTTAAAACAAGCGAAACCGAACGAACCGGATTCCCA‑CATTCGTGGGAATGACGGGAgt > 1:1221905/2‑149 gGATTAGAGTTTCAAAAGTTATTCTAAATAGCTGAAACTCAACGCACCGGATTCCCGCCTGCGCGGGAATGACGAAGTGGACGTTACCCGAAACTTAAAACAATCGAAACCGAACGAACCGGATTCCCA‑CTTTCGTGGGAATGACGGGATg > 1:636550/2‑150 gGATTAGAGTTTCAAAAGTTATTCTAAATAGCTGAAACTCAACGCACCGGATTCCCGCCTGCGCGGGAATGACGAAGTGGAAGTTACCCGAAACTTAAAACAAGCGAAACCGAACGAACCGGATTCCCA‑CTTTCGTGGGAATGACGGGATT > 1:624909/2‑151 gGATTAGAGTTTCAAAAGTTATTCTAAATAGCTGAAACTCAACGCACCGGATTCCCGCCTGCGCGGGAATGACGAAGTGGAAGTTACCCGAAACTTAAAACAAGCGAAACCGAACGAACCGGATTCCCA‑CTTTCGTGGGAATGACGGGATT > 2:1001460/2‑151 gGATTAGAGTTTCAAAAGTTATTCTAAATAGCTGAAACTCAACGCACCGGATTCCCGCCTGCGCGGGAATGACGAAGTGGAAGTTACCCGAAACTTAAAACAAGCGAAACAGAACGAACCGGATTCCAA‑CTTTCGTGGGAATGtggggagt > 1:483637/2‑143 AGTTTCAAACGTTATTCTACATAGCAGAAACTCAACGCACCGGATTCCCGCCTGCGCGGGAATGACGAAGTGGAAGTTACCCGAAACTTAAAACAAGCGAAACCGAACGAACCGGATTCCCA‑CTTTCGTGGGAATGACGGGATTTTAGG < 2:992968/149‑1 AGTTTCAAAAGTTATTCTAAATAGCTGAAACTCAACGCACCGGATTCCCGCCTGCGCGGGAATGACGAAGTGGAAGTTACCCGAAACTTAAAACAAGCGAAACCGAACGAACCGGATTCCCA‑CTTTCGTGGGAATGACGGGATTTTAGG < 1:107496/149‑1 AGTTTCAAAAGTTATTCTAAATAGCTGAAACTCAACGCACCGGATTCCCGCCTGCGCGGGAATGACGAAGTGGAAGTTACCCGAAACTTAAAACAAGCGAAACCGAACGAACCGGATTCCCA‑CTTTCGTGGGAATGACGGGATTTTAGG < 1:869238/149‑1 AAATTTATTCTAAATCGCTTAAACTCAACCCACCTGATTCCCCCCTGCGCGGGAATGACGAAGTGGAAGTTACCCGAAACTTAAAACAAGCGAAACCGAACGAACCGGATTCCCA‑CTTTCGTGGGAATGACGGGATTTTAGGTTTCTGATT < 1:285495/151‑1 aagTTATTCTAAATAGCTGAAACTCAACGCACCGGATTCCCGCCTGCGCGGGAATGACGATGTGGAAGTTACCCGAAACTTAAAACAAGCGAAACCGAACCAACCGGATTCCCA‑CTTTCGTGGGAATGACGGGAATTTAGGTTTCTGATTT > 2:1172056/4‑151 aagTTATTCTAAATAGCTGAAACTCAACGCACCGGATTCCCGCCTGCGCGGGAATGACGAAGTGGAAGTTACCCGAAACTTAAAACAAGCGAAACCGAACGAACCGGATTCCCA‑CTTTCGTGGGAATGACGGGATTTTAGGTTTCTGATTT > 1:1225089/4‑151 ATTCTAAATAGCTGAAACTCAACGCACCGGATTCCCGCCTGCGCGGGAATGACGAAGTGGAAGTTACCCGAAACTTAAAACAAGCGAAACCGAACGAACCGGATTCCCA‑CTTTCGTGGGAATGACGGGATTTTAGGTTTCTGATTTTGGTT > 1:865552/1‑151 AAATAGCTGAAACTCAACGCCCCGGATTCCCGCCTGCGCGGGAATGACGAAGTGGAAGTTACCCGAAACTTAAAACAAGCGAAACCGAACGAACCGGATTCCCA‑CTTTCGTGGGAATGACGGGATTTTAGGTTTCTGATTTTGGTTTTCTG < 1:57472/151‑1 GCTGAAACTCAACGCACCGGATTCCCGCCTGCGCGGGAATGACGAAGTGGAAGTTACCCGAAACTTAAAACAAGCGAAACCGAACGAACCGGAGTCCCA‑CTTTCGTGGGAATGACGGGATTTGAGGTGTCTGATTTTGGTTTTCTGTTTgt > 2:1428949/1‑149 ctcaacgcacctGATTCCCGCCGGCGCGGGAATGACGAAGTGGAAGTTACCCGAAACTTAAAACAAGCGACACCGAACGAACCGGATTCCCA‑CTTTCGTGGGAATGACGGGATTTTAGGTTTCTGATTTTGGTTTTCTGTTTTTGTAGGAA < 1:227258/139‑1 ctcaacgcACCGGATTCCCGCCTGCGCGGGAATGACGAAGTGGAAGTTACCCGAAACTTAAAACAAGCGAAACCGAACGAACCGGATTCCCA‑CTTTCGTGGGAATGACGGGATTTTAGGTTTCTGATTTTGGTTTTCTGTTTTTGTAGGAA < 2:865281/143‑1 ccaacctcagTCCCCCCTGCGCGGGAATGACGAAGTGGAAGTTACCCGAAACTTAAAACAAGCGAAACCGAACGAACCGGATTCCCA‑CTTTCGTGGGAATGACTGGATTTTAGGTTTCTGATTTTGGTTTTCTGTTTTTGTAGGAATGATG < 1:182587/141‑1 CCGGATTCCCGCCTGCGCGGGAATGACGAAGTGGAAGTTACCCGAAACTTAAAACAAGCGAAACCGAACGAACCGGATTCCCA‑CTTTCGTGGGAATGACGGGATTTTAGGTTTAGGATTTTGGTTTTCTGTTTTTGTAGGAATGTTGAAAT > 2:273945/1‑151 GATTCCCGCCTGCGCGGGAATGACGAAGTGGAAGTTACCCGAAACTTAAAACAAGCGAAACCGAACGAACCGGATTCCCA‑CTTTCGTGGGAATGACGGGATTTTAGGTTTCTGATTTTGGTTTTCTGTTTTTGTAGGAATGATGAAATTTT > 1:441051/1‑151 GATTCCCGCCTGCGCGGGAATGACGAAGTGGAAGTTACCCGAAACTTAAAACAAGCGAAACCGAACGAACCGGATTCCCA‑CGTTCGTGGGAATGACGGGAGTTTAGGTTTCTGAGTTTGGTTTTGTGTTTTTGTAGGAATGATGAACTTTT > 1:129469/1‑151 ATTCCCGCCTGCGCGGGAATGACGAAGTGGAAGTTACCCGAAACTTAAAACAATCGAAACCGAACGAACCGGATTCCCA‑CATTCGTGGGAAAGACGGGATTTTAGGTTTCTGATTTTGTTTTTCTGTTTTTGTAGGTATGATGTAATTTTt > 1:1412063/1‑150 ATTCCCGCCTGCGCGGGAATGACGAAGTGGAAGTTACCCGAAACTTAAAACAAGCGAAACCGAACGAACCGGATTCCCA‑CGTTCGTGGGAATGACGGGATTTTAGGTTTCTGATTTTGGTTTTCTGTTTTTGTAGGAATGATGGAATTTTG > 2:1156289/1‑151 ATTCCCGCCTGCGCGGGAATGACGAAGTGGAAGTTACCCGAAACTTAAAACAAGCGAAACCGAACGAACAGGATTCCCACTTG‑CGTGGGAATGACGGGATTTTAGGTTTCTGATTTTGGTTTTATGTTTTTGTAGGAATGATGAcagtttg > 2:255152/1‑144 ATTCCCGCCTGCGCGGGAATGACGAAGTGGAAGTTACCCGAAAATTAAAACAAGCGAAACCGAACGAACCGGATTCCCA‑CATTAGTGGGAATGACGGGAGGTTAGGTTTCTGATTTTGGTTTTCTGTTTTTGTAGGAATGATGTAATTTTG > 2:1156293/1‑151 TCCCGCCTGCGCGGGAATGACGAAGTGGAAGTTACCCGAAACTTAAAACAAGCGAAACCGAACGAACCGGATTCCCA‑CTTTCGTGGGAATGACGGGATTTTAGGTTTCTGATTTTGGTTTTCTGTTTTTGTAGGAATGATGAAATTTTGAG < 2:624716/151‑1 GCGCGGGAATGACGAAGTGGAAGTTACCCGAAACTTAAAACAAGCGAAACCGAACGAACCGGATTCCCA‑CTTTCGTGGGAATGACGGGATTTTAGGTTTCTGATTTTGGTTTTCTGTTTTTGTAGGAATGATGATATTTTGAGTTTTgggg > 1:1344621/1‑147 GCGCGGGAATGACGAAGTGGAAGTTACCCGAAACTTAAAACAAGCGAAACCGAACGAACCGGATTCCCA‑CTTTCGTGGGAATGACGGGATTTTAGGTTTCTGATTTTGGTTTTCTGTTTTTGTAGGAATGATGAAATTTTGAGTTTTAGGA > 1:1344613/1‑151 |||||||||||||| ATCCGGACATTCAATGCTAAGGCAATTTATCGGAAATGACTGAAACTCAAAAAACCGGATTCCCACTTTCGTGGGAATGACGCGATTAGAGTTTCAAAATTTATTCTAAATAGCTGAAGCTCAATGAACCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/260027‑260158‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGGAATGACGAAGTGGAAGTTACCCGAAACTTAAAACAAGCGAAACCGAACGAACCGGATTCCCA‑TTGTCGTGGAAATGACGGGATTTTAGGTTTCTGATTTTGGTTTTCTGTTTTTGTAGGAATGATGAAATTTTGAGTTTTAGGA < Exported/1888008‑1887862 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |