| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | Exported | 1,831,990 | 0 | G | A | 42.4% | 163.8 / inf | 301 | intergenic (‑123/+230) | BCHEFKBB_01881/BCHEFKBB_01882 | Opacity protein opA54 [NGO_09965]/transposase [NGO_09970] |
| Reads supporting (aligned to +/- strand): ref base G (92/79); new base A (82/44); total (178/123) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.70e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.89e-01 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 323 total aligned reads displayed.
GGCGTAAGCCAGATCCGCCTGCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGGCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTATTAAAAAGATTGTTAATAAACGCCAAGTATTTTATCAGATTTGTTTTGCCGGGATATGATTTGTTTTGTTAAAGAATGTATTTATTTTTTAAAATCCCGGCCAGCCGGGAT > Exported/1831844‑1832140 | ggCGTAAGCCAGATCCGCCTGCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGGCCGt > 1:985959/1‑151 (MQ=255)ggCGTAAGCCAGATCCGCCTGCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGGCCGt > 1:1396083/1‑151 (MQ=255) gCGTAAGCCAGATCCGCCTGCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGACGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGACCGTa > 2:174202/1‑151 (MQ=255) gCGTAAGCCAGATCCGCCTGCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGACCGTa > 1:1433561/1‑151 (MQ=255) tAAGCCAGCTCCGCCTGCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGCAGAGAAGAGAAGAGAAGTTTTTTGTCGGCCGTATGc < 2:704167/151‑1 (MQ=255) tAAGCCAGATCCGCCTGCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGGCCGTATGc < 2:147444/151‑1 (MQ=255) tAAGCCAGATCCGCCTGCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGGCCGTATGc < 2:1430561/151‑1 (MQ=255) tAAGCCAGATCCGCCTGCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGACCGTATGc < 1:174262/151‑1 (MQ=255) tAAGCCAGATCCGCCTGCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGACCGTATGc < 1:2336/151‑1 (MQ=255) aGCCAGATCCGCCTGCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGGCCGTATGCat > 2:1554307/1‑151 (MQ=255) aGCCAGATCCGCCTGCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGGCCGTATGCat > 1:1096525/1‑151 (MQ=255) aGCCAGATCCGCCTGCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGACCGTATGCat > 1:1599964/1‑151 (MQ=255) aGCCAGATCCGCCTGCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGACCGTATGCat > 1:1497211/1‑151 (MQ=255) aGCCAGATCCGCCTGCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGACCGTATGCat > 1:328992/1‑151 (MQ=255) aGCCAGATCCGCCTGCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGACCGTATGCat > 1:405524/1‑151 (MQ=255) aGCCAGATCCGCCTGCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGACCGGATGCat > 2:964570/1‑151 (MQ=255) aGCCAGATCCGCCTGCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCGGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTGTTTTGTCGACCGTATGCat > 1:1292740/1‑151 (MQ=255) ccAGATCCGCCTGCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGGCCGTATGCata < 1:3551/150‑1 (MQ=255) ccAGATCCGCCTGCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGACCGTATGCatat < 1:1056824/151‑1 (MQ=255) ccAGATCCGCCTGCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGACCGTATGCatat < 1:127593/151‑1 (MQ=255) aTCCGCGTGCAGATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGACGAGAA‑‑‑‑‑GAGAAGAGACGAGAAGAGAAGTTTTTTGTCGGCCGTATGCATATCa < 2:1616754/149‑1 (MQ=14) aTCCGCCTTCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGACGCGAAGCGAAGAGACGCGAA‑‑‑‑‑GAGAAGAGACGAGACGAGAAGTTTGTTGTCGACCGTAGGCATATCAAc < 2:699957/151‑1 (MQ=11) aTCCGCCTGCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGACGAGAAGAGAAGTTTTTTGTCGGCCGTATGCATATc < 1:310728/148‑1 (MQ=255) aTCCGCCTGCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGGCCGTATGCATATc < 1:667597/148‑1 (MQ=255) aTCCGCCTGCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGGCCGTATGCATATc < 2:1578865/148‑1 (MQ=255) aTCCGCCTGCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGGCCGTATGCATATc < 1:1452575/148‑1 (MQ=255) aTCCGCCTGCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGGCCGTATGCATATc < 2:134197/148‑1 (MQ=255) aTCCGCCTGCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGGCCGTATGCATATCAAc < 1:1116261/151‑1 (MQ=255) aTCCGCCTGCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGACCGTATGCATATc < 1:1488287/148‑1 (MQ=255) aTCCGCCTGCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTATTTTGTCGACCGTATGCATATCAAc < 2:282702/151‑1 (MQ=255) aTCCGCCTGCACAGACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGACCGTATGCATATc < 1:136053/148‑1 (MQ=255) aTCCGACTGCACATACGGGCCGCGACCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGACCGTATGCATATc < 1:794359/148‑1 (MQ=255) ccGCCTGCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGGCCGTATGCATATCAACTc < 1:279780/151‑1 (MQ=255) ccGCCTGCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGGCCGTATGCATATCAACTc < 1:925849/151‑1 (MQ=255) cGCCTGCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGACGAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGGCCGTATGCATATCa > 1:562328/1‑151 (MQ=14) cGCCTGCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGGCCGTATGCATATc > 2:268386/1‑145 (MQ=255) cGCCTGCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGGCCGTATGCATATCAACTc > 1:1678521/1‑150 (MQ=255) tGCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGGCCGTATGCATATCAACTCCGAat < 1:1164796/151‑1 (MQ=255) tGCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGGCCGTATGCATATCAACTCCGAat < 2:388644/151‑1 (MQ=255) gCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGGCGGTATGCATATCAACTCCGaaaa > 2:325830/1‑149 (MQ=255) gCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGACCGTATGCATATCAACTCCGAata > 1:1633159/1‑151 (MQ=255) gCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGACCGTATGCATATCAACTCCGAata > 1:86063/1‑151 (MQ=255) gCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGAACGTATTCATATCAAATCCGAata > 1:1507867/1‑151 (MQ=14) cacaTACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGGCCGTATGCATATCAACTCCGAatat > 1:1062418/1‑151 (MQ=255) acaTACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGGCCGTATGCATATCAACTCCGAatata > 2:596411/1‑150 (MQ=255) caTACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGTCCGTATGCATATCAACTCCGAatat > 2:1477766/1‑149 (MQ=255) caTACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGACCGTATGCATATCAACTCCGAatattt > 1:1206700/1‑149 (MQ=255) tACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGACCGTATGCATATCAACTCCGAATATTTaa > 2:508008/1‑151 (MQ=255) ggCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGTGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGTAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGACCGTATGCATATCAACTCCGAATATTTAAGAtt > 2:1258052/1‑151 (MQ=11) ggCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTGTTGTCGGCCGTATTCCTATCAACTCCGCATATCTactatt > 2:498685/1‑146 (MQ=17) cgcCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGACCGTATGCATATCAACTCCGAATATTTAAGATTAAatt > 1:1465424/1‑151 (MQ=255) cgcCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGAACGTATGCATATCAAATCCGAATATTTAAGATTAAatt > 1:1482478/1‑151 (MQ=14) cgcCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTGTATTGTCGGCCGTAAGCAAATCAACAACGAATATCTAAGATTAAatt > 1:608216/1‑151 (MQ=17) cccATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGTGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTGTTTTGTCGACCGTATGCATATCTACTCCGAGTATTTATGATTAAattat > 2:1356888/1‑151 (MQ=11) cccATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGGCCGTATGCATATCAACTCCGAATATCTAAGATTAAattat > 2:812855/1‑151 (MQ=255) cccATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGGCCGTATGCATATCAACTCCGAATATCTAAGATTAAattat > 2:709944/1‑151 (MQ=255) tGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGACCGTATGCATATCAACTCCGAATATTTAAGATTAAATTATTaaa < 1:1108411/151‑1 (MQ=255) gTCTTCACCCGCCGCCCGCGCTGCGGACGAGAAGAGAAGAGAAGAGACGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGACCGTATGCATATCCACTCCGAATATTTAAGATTAAATTATTaaaag > 2:1484650/1‑150 (MQ=11) gTCTTCACCCGCCGCCCGCGCTGCGGAAGAGACGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGACCGTATGCATATCAACTCCGAATATTTAAGATTAAATTATTaaaag > 1:1198229/1‑150 (MQ=255) gTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGGCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTATTataaa > 1:1229252/1‑151 (MQ=255) gTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGACCGTATGCATATCAACTCCGAATATTTAAGATTAAATTATTaaatt > 2:1413806/1‑149 (MQ=255) gTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGACCGTATGCATATCAACTCCGAATATTTAAGATTAAATTATTaaaag > 1:1220735/1‑150 (MQ=255) gTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGACCGTATGCATATCAACTCCGAATATTTAAGATTAAATTATTaaaag > 1:888834/1‑150 (MQ=255) gTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGACCGTATGCATATCAACTCCGAATATTTAAGATTAAAGTATTaaaag > 2:532482/1‑150 (MQ=255) tCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGACCGTATGCATATCAACTCCGAATATTTAAGATTAAATTATTaaaaga < 1:1421400/151‑3 (MQ=255) tCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGACCGTATGCATATCAACTCCGAATATTTAAGATTAAATTATTaaaaga < 1:996808/151‑3 (MQ=255) tCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGACCGTATGCATATCAACTCCGAATATTTAAGATTAAATTATTAAAA‑GATTg > 1:898138/1‑151 (MQ=255) cTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGGCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTATTAAAAAGATTGTTAATAAACGCCAAg > 1:533143/1‑151 (MQ=255) gCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGGCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTATTAAAAAGATTGTTAATAAAATCCAAGTa > 1:770537/1‑151 (MQ=255) cGGAAGAGAAGAGAAGAGAAGAGAAGAGACGCGAAGCGAAGAGACCAGAC‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGGCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTATTAAAAAGATTGTTAATAAACGCCAAGTa < 1:1554841/150‑1 (MQ=17) agaagagaagagaagagaagagaagagaagagaagagaagagaa‑‑‑‑‑gagaagagaagagaagagaagTTTTTTGTCGGCCGTATGCATATCAACTCCGAATCTCTAAGATTAAATTATTAAAAAGATTGTTAATAAACGCCAAGTATTTTAt < 2:828130/150‑1 (MQ=255) gaagagaagagaagagaagagaagagaagagaagagaagagaa‑‑‑‑‑gagaagagaagagaagagaagTTTTTTGTCGGCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTATTAAAAAGATTGTTAATAAACGCCAAGTATTTTAtaa > 2:1153542/1‑149 (MQ=255) gaagagaagagaagagaagagaagagaagagaagagaagagaa‑‑‑‑‑gagaagagaagagaagagaagTTTTTTGTCGGCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTAATAAAAAGATTGTTAATAAACGCAAAGTATTTTATCa > 2:189732/1‑151 (MQ=255) gaagagaagagaagagaagagaagagaagagaagagaagagaa‑‑‑‑‑gagaagagaagagaagagaagTTTTTTGTCGGCCGTATGCATATCAACTCCGAAAATCTAAGATTAAATTATTAAAAAGATTGTTAATAAACGCCAATTATTTTATCa > 1:1092060/1‑151 (MQ=255) gaagagaagagaagagaagagaagagaagagaa‑‑‑‑‑gagaagagaagagaagagaagTTTTTTGTCGGCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTATTAAAAAGATTGTTAATAAACGCCAAGTATTTTATCAGATTTGtttt > 2:1145181/1‑151 (MQ=255) gaagagaagagaagagaagagaagagaagagaa‑‑‑‑‑gagaagagaagagaagagaagTTTTTTGTCGGCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTATTAAAAAGATTGTTAATAAACGCCAAGTATTTTATCAGATTTGtttt > 1:682873/1‑151 (MQ=255) aagagaagagaagagaagagaagagaagagaa‑‑‑‑‑gagaagagaagagaagagaagTTTTTTGTCGGCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTATTAAAAAGATTGTTAATAAACGCCAAGTATTTTATCAGATTTGttt < 2:985633/149‑1 (MQ=255) gagaagagaagagaagagaagagaagagaa‑‑‑‑‑gagaagagaagagaagagaagTTTTTTGTCGGCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTATTAAAAAGATTGTTAATAAACGCCAAGTATTTTATCAGATTTGTTTTGc > 2:468262/1‑150 (MQ=255) gagaagagaagagaagagaagagaa‑‑‑‑‑gagaagagaagagaagagaagTTTTTTGTCGGCCGTATGCATATCAACTACGAATATCTAAGATTAAATTATTAAAAAGATTGTTAATAAACGCCAAGTATTTTATAAGATTTGTTTTGCCGGGat > 2:1462843/1‑151 (MQ=255) agacgagacgagacgagac‑‑‑‑‑gagaagagaagagaagagcagTTTTTTGTCGGCCGTATGCATATCAACTCCGAATATCTAAGCTTAAATTATTAAAAAGATTGTTAATAAACGCCAAGTATTTTATCAGATTTGTTTTGCCGGGATATGAt < 2:759015/146‑1 (MQ=14) acgacaagaccagagaa‑‑‑‑‑gagaagagaagagaagcgaagTTTTGTGTCGGCCGTATGCATATCAACTCCGAAGATCTAAGATTAAATTATTAAAAAGATTGTTAATAAACGCCAAGTATTTTATCAGATTTGTTTTGCCGGGATATGAtt < 2:1543803/138‑1 (MQ=14) gaagagaagagaa‑‑‑‑‑gagaagagaagagaagagaagTTTTTTGTCGGCCGTATGc > 2:953696/1‑53 (MQ=38) gagaa‑‑‑‑‑gagaagagaagagaagagaagTTTTTTGTCGGCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTATTAAAAAGATTGTTAATAAACGCCAAGTATTTTATCAGATTTTTTTTGCCGGGATATGATTTGTTTTGTTAAAGa > 1:505638/1‑151 (MQ=255) agaa‑‑‑‑‑gagaagagaagagaagagaagTTTTTTGTCGGCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTATTAAAAAGATTGTTAATAAACGCCAAGTATTTTATCAGATTTGTTTTGCCGGGATATGATTTGTTTTGTTAAAg < 2:61516/149‑1 (MQ=255) gaa‑‑‑‑‑gagaagagaagagaagagaagTTTTTTGTCGGCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTATTAAAAAGATTGTTAATAAACGCCAAGTATTTTATCAGATTTGTTTTGCCGGGATATGATTTGTTTTGTTAAAgtat > 1:1021389/1‑148 (MQ=255) gaa‑‑‑‑‑gagaagagaagagaagagaagTTTTTTGTCGGCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTATTAAAAAGATTGTTAATAAACGCCAAGTATTTTATCAGATTTGTTTTGCCGGGATATGATTTGTTTTGTTAAAGAAt > 2:431986/1‑151 (MQ=255) aa‑‑‑‑‑gagaagagaagagaagagaagTTTTTTGTCGGCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTATTAAAAAGATTGTTAATAAACGCCAAGTATTTTATCAGATTTGTTTTGCCGGGATATGATTTGTTTTGTTAAAGaa < 1:939557/149‑1 (MQ=255) gaagagaagagaagagaagTTTTTTGTCGGCCGTATGCATAACAAATCCGAATATCTAAGATTAAATTATTAAAAAGATTGTTAATAAACGCCAAGTATTTTATAAGATTTGTTTTGCCGGGATATGATTTGTTTTGTTAAATAATTtatt > 1:735687/1‑151 (MQ=14) actcgacgagaagagaagTTTTTTGTCGGCCGTATGAATATCAACTCCGAATATCTAAGATTAACTTATTAAAAAGATTGTTAATAAACGCCAAGTATTTTATCAGATTTGTTTTGCCGGGATATGATTTGTTTTGTTAAAGAATGtatt < 2:1502819/143‑1 (MQ=14) aagagaagagaagagaagTTTTTTGTCGGCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTATTAAAAAGATTGTTAATAAACGCCAAGTATTTTATCAGATTTGTTTTGCCGGGATATGATTTGTTTTGTTAAAGAATGtatt < 1:468414/150‑1 (MQ=255) agaagagaagagaagTTTTTTGTCGGCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTATTAAAAAGATTGTTAATAAACGCCAAGTATTTTATCAGATTTGTTTTGCCGGGATATGATTTGTTTTGTTAAAGAATGtattta < 2:584587/149‑1 (MQ=255) gaagagaagagaagTTTTTTGTCGGCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTATTAAAAATATTGTTAATAAACGCCAAGTATTTTATCAGATTTGTTTTGCCGGGATATGATTTGTTTTGTTAAAGAATGTatttattt > 2:1219812/1‑151 (MQ=255) aagagaagagaagTTTTTTGTCGGCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTATTAAAAAGATTGTTAATAAACGCCAAGTATTTTATCAGATTTGTTTTGCCGGGATATGATTTGTTTTGTTAAAGAATGtatttatt < 2:867832/149‑1 (MQ=255) gCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTATTAAAAAGATTGTTAATAAACGCCAAGTATTTTATCAGATTTGTTTTGCCGGGATATGATTTGTTTTGTTAAAGAATGTATTTATTTTTTAAAATCCCGGCCAGCCGGGAt > 2:603675/1‑151 (MQ=255) gCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTATTAAAAAGATTGTTAATAAACGCCAAGTATTTTATCAGATTTGTTTTGCCGGGATATGATTTGTTTTGTTAAAGAATGTATTTATTTTTTAAAATCCCGGCCAGCCGGGAt > 2:1264820/1‑151 (MQ=255) gCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTATTAAAAAGATTGTTAATAAACGCCAAGTATTTTATCAGATTTGTTTTGCCGGGATATGATTTGTTTTGTTAAAGAATGTATTTATTTTTTAAAATCCCGGCCAGCCGGGAt > 2:913747/1‑151 (MQ=255) gCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTATTAAAAAGATTGTTAATAAACGCCAAGTATTTTATCAGATTTGTTTTGCCGGGATATGATTTGTTTTGTTAAAGAATGTATTTATTTTTTAAAATCCCGGCCAGCCGGGAt > 2:1522146/1‑151 (MQ=255) gCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTATTAAAAAGATTGTTAATAAACGCCAAGTATTTTATCAGATTTGTTTTGCCGGGATATGATTTGTTTTGTTAAAGAATGTATTTATTTTTTAAAATCCCGGCCAGCCGGGAt > 1:1556485/1‑151 (MQ=255) gCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTATTAAAAAGATTGTTAATAAACGCCAAGTATTTTATCAGATTTGTTTTGCCGGGATATGATTTGTTTTGTTAAAGAATGTATTTATTTTTTAAAATCCCGGCCAGCCGGGAt > 2:1522183/1‑151 (MQ=255) gCCGTATGCATATCAACTCCGAATATCTAAGAATAAATTATTAAAAAGATTGTTAATAAACGCCAAGTATTTTATCAGATTTGTTTTGCCGGGATATGATTTGTTTTGTTAAAGAATGTATTTATTTTTTAAAATCCAGGCCAGCCGGGAt > 2:1100006/1‑151 (MQ=255) | GGCGTAAGCCAGATCCGCCTGCACATACGGGCCGCGCCCATGGTCTTCACCCGCCGCCCGCGCTGCGGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA‑‑‑‑‑GAGAAGAGAAGAGAAGAGAAGTTTTTTGTCGGCCGTATGCATATCAACTCCGAATATCTAAGATTAAATTATTAAAAAGATTGTTAATAAACGCCAAGTATTTTATCAGATTTGTTTTGCCGGGATATGATTTGTTTTGTTAAAGAATGTATTTATTTTTTAAAATCCCGGCCAGCCGGGAT > Exported/1831844‑1832140 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |