| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | Exported | 42,301 | 5 bp→CCGGC | coding (156‑160/462 nt) | BCHEFKBB_00042 ← | acetyl‑CoA carboxylase [NGO_0045] |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | Exported | 42,301 | 0 | T | C | 100.0% | 91.7 / NA | 25 | T54A (ACC→GCC) | BCHEFKBB_00042 | acetyl‑CoA carboxylase [NGO_0045] |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (19/6); total (19/6) | |||||||||||
| * | Exported | 42,302 | 0 | A | C | 100.0% | 89.1 / NA | 25 | C53P (TGT→CCG) | BCHEFKBB_00042 | acetyl‑CoA carboxylase [NGO_0045] |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base C (19/6); total (19/6) | |||||||||||
| * | Exported | 42,303 | 0 | C | G | 96.0% | 86.0 / ‑6.7 | 25 | C53P (TGT→CCG) | BCHEFKBB_00042 | acetyl‑CoA carboxylase [NGO_0045] |
| Reads supporting (aligned to +/- strand): ref base C (0/1); new base G (19/5); total (19/6) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.40e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| * | Exported | 42,304 | 0 | A | G | 100.0% | 85.8 / NA | 25 | C53P (TGT→CCG) | BCHEFKBB_00042 | acetyl‑CoA carboxylase [NGO_0045] |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (19/6); total (19/6) | |||||||||||
| * | Exported | 42,305 | 0 | A | C | 96.0% | 90.7 / NA | 25 | A52A (GCT→GCG) | BCHEFKBB_00042 | acetyl‑CoA carboxylase [NGO_0045] |
| Reads supporting (aligned to +/- strand): ref base A (0/1); new base C (19/5); total (19/6) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.40e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCGGCATTCGGGCCGGGCGCGCGGTAGAACGTGCCGACCATAGGCGATTTTTGAGCGTCGGACAAATCGCGGGCGGCCGGCGCGGCGGCGGGCGCGGATGCCGCAACGGGTGCGGCGGCCGGCGTTACGGTACAAGCGGCGGCAGGTACGGGCGCGGCGTAAACGGGAGCTGCCGCAGCTGCAATGGTACGGGTAATGCGGACTTTTTCCTCGCCTTCGGTTACTTCGATTTCGGCGATACCCGATTCTTCAACCAAATCAATCA > Exported/42171‑42435 ||||| gcggcATTCGGGCCGGGCGCGCGGTAGAACGTGCCGACCATAGGCGATTTTTGAGCGTCGGACAAATCGCGGGCGGCCGGCGCGGCGGCGGGCGCGGATGCCGCAACGGGTGCGGCGGCCGGCGTTACGGCCGGCGCGGCGGCAGGTACg < 2:375360/150‑1 (MQ=255)gcggcATTCGGGCCGGGCGCGCGGTAGAACGTGCCGACCATAGGCGATTTTTGAGCGGCGGACAAATCGCGGGCGGCCGGCGCGGCGGCGGGCGCGGATGCCGCAACGGGTGCGGCGGCCGGCGTTACGGCCGGCGCGGCGGCAGGTACg < 2:375361/150‑1 (MQ=255) cggcATTCGGGCCGGGCGCGCGGTAGAACGTGCCGACCAGAGGCGATTTTTGAGCGTCGGACAAATCGCGGGCGGCCGGCGCGGCGGCGGGCGCGGATGCCGCAACGGGTGCGGCGGCCGGCGTTACGGCCGGCGCGGCGGCAGGTACggg < 2:482970/151‑1 (MQ=255) gcATTGGGGCCGGGCGCGGGGTAGAACGTGCTGAGCATAGGCGATTTTTGAGCGTCGGACAAATCGCGGGCGGCCGGCGCGGCGGCGGGCGCGGATGCCGCAACGGGTGCGGCGGCCGGCGTTACGGCCGGCGCGGCGGCAGGTACggg < 2:1023131/149‑1 (MQ=255) cgcccgcgGAAGAACGTGCCGACCATATGCGATTTTTGAGCGACGGACAAATCGCGGTCTGCCGCCGCTGCGGCGGGCGCGCCTGCCTCCACGGGAGGGGCCCGCGGCGTTAAGGCCCGAGCGGCGGCAGGAACGGGCGCGGCGTAAACgg < 2:246220/147‑1 (MQ=255) gcgcggcgGCGGGCGCGGATGCCGCAACGGGTGCGGCGGCCGGCGTTACGGCCGGCGCGGCGGCAGGTACGGGCGCGGCGTAAACGGGAGCTGCCGCAGCTGCAATGGTACGGGTAATGCGGACTTTTTCCTCGCCTTCGGTTACTTCGAt > 1:1245254/1‑151 (MQ=255) gcgcggcgGCGGGCGCGGATGCCGCAACGGGTGCGGCGGCCGGCGTTACGGCCGGCGCGGCGGCAGGTACGGGCGCGGCGTAAACGGGAGCTGCCGCAGCTGCAATGGTACGGGTAATGCGGACTTTTTCCTCGCCTTCGGTTACTTCGAt > 1:1482147/1‑151 (MQ=255) gcgcggcgGCGGGCGCGGATGCCGCAACGGGTGCGGCGGCCGGCGTTACGGCCGGCGCGGCGGCAGGTACGGGCGCGGCGTAAACGGGAGCTGCCGCAGCTGCAATGGTACGGGTAATGCGGACTTTTTCCTCGCCTTCGGTTACTTCGAt > 2:150298/1‑151 (MQ=255) gcgcggcgGCGGGCGCGGATGCCGCAACGGGTGCGGCGGCCGGCGTTACGGCCGGCGCGGCGGCAGGTACGGGCGCGGCGTAAACGGGAGCTGCCGCAGCTGCAATGGTACGGGTAATGCGGACTTTTTCCTCGCCTTCGGGTACTTCGAt > 2:1618419/1‑151 (MQ=255) gcgcggcgGCGGGCGCGGATGCCGCAACGGGTGCGGCGGCCGGCGGTCCGGCCGGCGCGGCGGCAGGTACGGGCGCGGCGTAAACGGGAGCTGCCGCAGCTGCAATGGTACGGGTAATGCGGACTTTTTCGTCGCCTTCGGTTACTTCGAt > 2:150280/1‑151 (MQ=255) gcggcggGCGCGGATGCCGCAACGGGTGCGGCGGCCGGCGTTACGGCCGGCGCGGCGGCAGGTACGGGCGCGGCGTACACGGGAGCTGCCGCAGCTGCACGGGTACGGGTCATGCGGACTTTTTCCTCGCCTGCGGGTACTTCTATTTCgg > 2:1009925/1‑151 (MQ=255) gggcgCGGATGCCGCAACGGGTGCGGCGGCCGGCGTTACGGCCGGCGCGGCGGCAGGTACGGGCGCGGCGTAAACGGGAGCTGCCGCAGCTGCAATGGTACGGGTAATGCGGACTTTTTCCTCGCCTTCGGTTACTTCGATTTCGGCGATa > 1:1421885/1‑151 (MQ=255) ggcgCGGATGCCGCAACGGGTGCGGCGGCCGGCGTTACGGCCGGCGCGGCGGCTGGTACGGGCGCGGCGTACCCGGGAGCTGCCGCAGCTGCAATGGTACGGGTCATGCGGACTGTTTCCTCGCCTTCGGGTACTTCGATTTCGGCGATa > 1:397089/1‑150 (MQ=255) ggcgCGGATGCCGCAACGGGTGCGGCGGCCGGCGTTACGGCCGGCGCGGCGGCAGGTACGGGCGCGGCGTAAACGGGAGCTGCCGCAGCTGCAATGGTACGGGTAATGCGGACTTTTTCCTCGCCTTCGGTTACTTCGATTTCGGCGATa > 1:397093/1‑150 (MQ=255) ggcgCGGATGCCGCAACGGGTGCGGCGGCCGGCGTTACGGCCGGCGCGGCGGCAGGTACGGGCGCGGCGTAAACGGGAGCTGCCGCAGCTGCAATGGTACGGGTAATGCGGACTTTTTCCTCGCCTTCGGTTACTTCGATTTCGGCGATa > 1:397088/1‑150 (MQ=255) ggcgCGGATGCCGCAACGGGTGCGGCGGCCGGCGTTACGGCCGGCGCGGCGGCAGGTACGGGCGCGGCGTAAACGGGAGCTGCCGCAGCTGCAATGGTACGGGTAATGCGGACTTTTTCCTCGCCTTCGGTTACTTCGATTTCGGCGATa > 2:938436/1‑150 (MQ=255) ccGCAACGGGTGCGGCGGCCGGCGTTCCGGCCGGCGCGGCGGCAGGTACGGGCGCGGCGTAAACGGGAGCTGCCGCAGCTGCAATGGTa > 1:1499933/1‑89 (MQ=255) ccGCAACGGGTGCGGCGGCCGGCGTTACGGCCGGCGCGGCGGCAGGTACGGGCGCGGCGTAAACGGGAGCTGCCGCAGCTGCAATGGTa < 2:1499414/89‑1 (MQ=255) cGGGTGCGGCGGCCGGCGTTACGGCCGGCGCGGCGGCAGGTACGGGCGCGGCGTAAACGGGAGCTGCCGCAGCTGCAATGGTACGGGTAATGCGGACTTTTTCCTCGCCTTCGGTTACTTCGATGTCGGCGATACCCGAttcttctcccca > 2:708254/1‑145 (MQ=255) gggTGCGGCGGCCGGCGTTACGGCCGGCGCGGCGGCAGGTACGGGCGCGGCGTAAACGGGAGCTGCCGCAGCTGCAATGGTACGGGTAATGCGGACTTTTTCCTCGCCTTCGGTTACTTCGATTTCGGCGATACCCGATTCTTCAACCaaa > 1:254715/1‑151 (MQ=255) gggTGCGGCGGCCGGCGTTACGGCCGGCGCGGCGGCAGGTACGGGCGCGGCGTAAACGGGAGCTGCCGCAGCTGCAATGGTACGGGTAATGCGGACTTTTTCCTCGCCTTCGGTTACTTCGATTTCGGCGATACCCGATTCTTCAACCaaa > 1:1632872/1‑151 (MQ=255) gggTGCGGCGGCCGGCGTTACGGCCGGCGCGGCGGCAGGTACGGGCGCGGCGTAAACGGGAGCTGCCGCAGCTGCAATGGTACGGGTAATGCGGACTTTTTCCTCGCCTTCGGTTACTTCGATTTCGGCGATACCCGATTCTTCAACCaaa > 1:1613307/1‑151 (MQ=255) gggTGCGGCGGCCGGCGTTACGCCCGGCGCGGCGGCAGGTACGGGCGCGGCGTAAACGGGAGCTGCCGCAGCTGCAATGGTACGGGTAATGCGGACTTTTTCCTCGCCTTCGGTTACTTCGATTTCGGCGATACCCGATTCTTCAACCaaa > 1:1613297/1‑151 (MQ=255) gcggcCGGCGTTACGGCCGGCGCGGCGGCAGGTACGGGCGCGGCGTAAACGGGAGCTGCCGCAGCTGCAATGGTACGGGTAATGCGGACTTTTTCCTCGCCTTCGGTTACTTCGATTTCGGCGATACCCGATTCTTGAACCAAatcaatca > 2:170107/1‑151 (MQ=255) gcggcCGGCGTTACGGCCGGCGCGGCGGCAGGTACGGGCGCGGCGTAAACGGGAGCTGCCGCAGCTGCAATGGTACGGGTAATGCGGACTTTTTCCTCGCCTTCGGTTACTTCGATTTCGGCGATACCCGATTCTTCAACCAaatcaagca > 2:170002/1‑148 (MQ=255) ||||| GCGGCATTCGGGCCGGGCGCGCGGTAGAACGTGCCGACCATAGGCGATTTTTGAGCGTCGGACAAATCGCGGGCGGCCGGCGCGGCGGCGGGCGCGGATGCCGCAACGGGTGCGGCGGCCGGCGTTACGGTACAAGCGGCGGCAGGTACGGGCGCGGCGTAAACGGGAGCTGCCGCAGCTGCAATGGTACGGGTAATGCGGACTTTTTCCTCGCCTTCGGTTACTTCGATTTCGGCGATACCCGATTCTTCAACCAAATCAATCA > Exported/42171‑42435 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |