| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | Exported | 1,383,884 | 0 | G | T | 31.2% | 328.7 / 33.6 | 177 | D267Y (GAT→TAT) | BCHEFKBB_01424 | thiamine biosynthesis protein ApbE [NGO_1420] |
| Reads supporting (aligned to +/- strand): ref base G (79/42); new base T (0/55); total (80/97) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.88e-19 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 177 total aligned reads displayed.
AATGCGCACGGCGAACCGTGGCGCATCGGTATAGAGCAACCCAATATCATCCAAGGCGGCAATACGCAGATTATCGTCCCGCTGAACAACCGTTCGCTTGCCACTTCCGGCGATTACCGTATTTTCCACGTCGATAAAAACGGCAAA‑CGCCTCTCCCACATCATCAATCCCAACAACAAACGACCCATCAGCCACAACCTCGCCTCCATCAGCGTGGTCTCAGACAGTGCAATGACGGCGGACGGTTTATCCACAGGATTATTTGTTTTAGGC > Exported/1383752‑1384024 | caTGCGCACGGCGCCCCGTGGCGCATCGGTATAGAGCAACCCAATATCCTCCAAGGCGGCCATACGCAGATTATCGTCCCGCTGACCAACCGTTCGCTGGCCACTTCCGGCGATTACCGTATTTTCCACGTCGATAAAAACGGCAAA‑CGcc < 2:1534511/150‑1 (MQ=255)aaTGCGCACGGCGAACCGTGGCGCATCGGTATAGAGCAACCCAATATCATCCAAGGCGGCAATACGCAGATTATCGTCCCGCTGAACAACCGTTCGCTTGCCACTTCCGGCGATTACCGTATTTTCCACGTCGATAAAAACGGCAAA‑CGcc < 1:231971/151‑1 (MQ=255) gcgcACGGCGAACCGTGGCGCATCGGTATAGAGCAACCCAATATCATCCAAGGCGGCAATACGCAGATTATCGTCCCGCTGAACAACCGTTCGCTTGCCACTTCCGGCGATTACCGTATTTTCCACGTCGATAAAAACGGCAAA‑CGCct > 2:443617/1‑149 (MQ=255) gcgcACGGCGAACCGTGGCGCATCGGTATAGAGCAACCCAATATCATCCAAGGCGGCAATACGCAGATTATCGTCCCGCTGAACAACCGTTCGCTTGCCACTTCCGGCGATTACCGTATTTTCCACGTCGATAAAAACGGCAAA‑CGCct > 2:1104066/1‑149 (MQ=255) cACGGCGAACCGTGGCGCATCGGTATAGAGCAACCCAATATCATCCAAGGCGGCAATACGCAGATTATCGTCCCGCTGAACAACCGTTCGCTTGCCACTTCCGGCTATTACCTTATTTTCCACGTCTATAAAAAGGGCAAA‑CGCCTCTccc < 2:1387989/151‑1 (MQ=255) cACGGCGAACCGTGGCGCATCGGTATAGAGCAACCCAATATCATCCAAGGCGGAAATACGCAGATTATCGTCCCGCTGAACAACGGTTTGCTTGCCACTTCCGGCGTTTACCGTATTTTCCACGTCTATAAAAACGGCAAA‑CGCCTCTcc < 1:1012579/150‑1 (MQ=255) cGGCGAACCGTGGCGCATCGGTATAGAGCAACCCAATATCATCCAAGGCGGCAATACGCAGATTATCGTCCCGCTGAACAACCGTTCGCTTGCCACTTCCGGCGATTACCGTATTTTCCACGTCGATAAAAACGGCACT‑CGCCTCTCCca > 2:1310160/1‑150 (MQ=255) ggCGAACCGTGGCGCATCGGTATAGAGCAACCCAATATCAGCCAAGGCGGCAATACGCAGATTATCGTCCCGCTGAACAACCGTTCGCTTGCCACTTCCGGCGATTACCGTATTTTCCACGTCGATAAAAACGGCAAA‑CGCCTCTCCcac < 2:492021/150‑1 (MQ=255) gCGAACCGTGGCGCATCGGTATAGAGCAACCCAATATCATCCAAGGCGGCAATACGCAGATTATCGTCCCGCTGAACAACCGTTCGCTTGCCACTTCCGGCGATTACCGTATTTTCCACGTCGATAAAAACGGCAAA‑CGCCTCTCCcaca < 2:778469/150‑1 (MQ=255) gCGAACCGTGGCGCATAGGTATAGAGCAACCCAATATCATCCAAGGCGGCAATACGCAGATTATCGTCCCGCTGAACAACCGTTCGCTTGCCACTTCCGGCGATTACCGTATTTTCCACGTCGATAAAAACGGCAAA‑CGCCTCTCCcaca < 2:778467/150‑1 (MQ=255) cGAACCGTGGCGCATCGGTATAGAGCAACCCAATATCATCCAAGGCGGCAATACGCAGATTATCGTCCCGCTGAACAACCGTTCGCTTGCCACTTCCGGCTATTACCGTTTTTTCCACGTCGATAAAAACGGCAAA‑CGCCTCTCCCAcatc < 1:1411153/151‑1 (MQ=255) ccGTGGCGCATCGGTATAGAGCAACCCAATATCATCCAAGGCGGCAATACGCAGATTATCGTCCCGCTGAACAACCGTTCGCTTGCCACTTCCGGCGATTACCGTATTTTCCACGTCGATAAAAACGGCAAA‑CGCCTCTCCCACAtcatca > 2:536640/1‑151 (MQ=255) cGTGGCGAATCGTTATAGAGCAACCCAATATCATCCAAGGCGGAAATACGCTGATTATCGTCCCGATGAACAACCGTTCGCTTGCCATTTCCGGCGATTACCTTATTTTCCACGTCGATAAAAACGGCAAA‑CGCCTCTCCCACATCATCaa < 1:382309/151‑1 (MQ=255) cATCGGTATAGAGCAACCCAATATCATCCAAGGCGGCAATACGCAGATTATCGTCCCGCTGAACAACCGTTCGCTTGCCACTTCCGGCGATTACCGTATTTTCCACGTCGATAAAAACGGCAAA‑CGCCTCTCCCACATCATCAATCCcaa > 2:267594/1‑150 (MQ=255) tCGGTATAGAGCAACCCAATATCATCCAAGGCGGCAATACGCAGATTATCGTCCCGCTGAACAACCGTTCGCTTGCCACTTCCGGCGATTACCGTATTTTCCACGTCGATAAAAACGGCAAA‑CGCCTCTCCCACATCATCAATCCcaacaa > 1:61363/1‑151 (MQ=255) ggTATAGAGCAACCCAATATCATCCAAGGCGGCAATACGCAGATTATCGTCCCGCTGAACAACCGTTCGCTTGCCACTTCCGGCGATTACCGTATTTTCCACGTCGATAAAAACGGCAAA‑CGCCTCTCCCACATCATCAATCCcaacaaca > 2:1514989/1‑151 (MQ=255) gTATAGAGCAACCCAATATCATCCAAGGCGGCAATACGCAGATTATCGTCCCGCTGAACAACCGTTCGCTTGCCACTTCCGGCGATTACCGTATTTTCCACGTCGATAAAAACGGCAAA‑CGCCTCTCCCACATCATCAATCCcaacaacaa > 2:1255729/1‑151 (MQ=255) gTATAGAGCAACCCAATATCATCCAAGGCGGCAATACGCAGATTATCGTCCCGCTGAACAACCGTTCGCTTGCCACTTCCGGCGATTACCGTATTTTCCACGTCGATAAAAACGGCAAA‑CGCCTCTCCCACATCATCAATCCcaacaacaa > 1:249938/1‑151 (MQ=255) gTATAGAGCAACCCAATATCATCCAAGGCGGCAATACGCAGATTATCGTCCCGCTGAACAACCGTTCGCTTGCCACTTCCGGCGATTACCGTATTTTCCACGTCGATAAAAACGGCAAA‑CGCCTCTCCCACATCATCAATCCcaacaacaa > 1:330358/1‑151 (MQ=255) gTATAGAGCAACCCAATATCATCCAAGGCGGCAATACGCAGATTATCGTCCCGCTGAACAACCGTTCGCTTGCCACTTCCGGCGATTACCGTATTTTCCACGTCGATAAAAACGGCAAA‑CGCCTCTCCCACATCATCAATCCcaacaacaa > 1:374229/1‑151 (MQ=255) gTATAGAGCAACCCAATATCATCCAAGGCGGCAATACGCAGATTATCGTCCCGCTGAACAACCGTTCGCTTGCCACTTCCGGCGATTACCGTATTTTCCACGTCGATAAAAACGGCAAA‑CGCCTCTCCCACATCATCAATCCcaacaacaa > 1:660212/1‑151 (MQ=255) gTATAGAGCAACCCAATATCATCCAAGGCGGCAATACGCAGATTATCGTCCCGCTGAACAACCGTTCGCTTGCCACTTCCGGCGATTACCGTATTTTCCACGTCGATAAAAACGGCAAA‑CGCCTCTCCCACATCATCAATCCcaacaacaa > 2:1426567/1‑151 (MQ=255) gTATAGAGCAACCCAATATCATCCAAGGCGGCAATACGCAGATTATCGTCCCGCTGAACAACCGTTCGCTTGCCACTTCCGGCGATTACCGTATTTTCCACGTCGATAAAAACGGCAAA‑CGCCTCTCCCACATCATCAATCCcaacaacaa > 2:1531388/1‑151 (MQ=255) gTATAGAGCAACCCAATATCATCCAAGGCGGCAATACGCAGATTATCGTCCCGCTGAACAACCGTTCGCTTGCCACTTCCGGCGATTACCGTATTTTCCACGTCGATAAAAACGGCAAA‑CGCCTCTCCCACATCATCAATCCcaacaacaa > 1:1311792/1‑151 (MQ=255) gTATAGAGCAACCCAATATCATCCAAGGCGGCAATACGCAGATTATCGTCCCGCTGAACAACCGTTCGCTTGCCACTTCCGGCGATTACCGTATTTTCCACGTCGATAAAAACGGCAAA‑CGCCTCTCCCACATCATCAATCCcaacaacaa > 1:185379/1‑151 (MQ=255) gTATAGAGCAACCCAATATCATCCAAGGCGGCAATACGCAGATTATCGTCCCGCTGAACAACCGTTCGCTTGCCACTTCCGGCGATTACCGTATTTTCCACGTCGATAAAAACGGCAAA‑CGCCTCTCCCACATCATCAATCCcaacaacaa > 1:1604298/1‑151 (MQ=255) gTATAGAGCAACCCAATATCATCCAAGGCGGCAATACGCAGATTATCGTCCCGCTGAACAACCGTTCGCTTGCCACTTCCGGCGATTACCGTATTTTCCACGTCGATAAAAACGGCAAA‑CGCCTCTCCCACATCATCAATCCcaacaacaa > 1:1287252/1‑151 (MQ=255) gTATAGAGCAACCCAATATCATCCAAGGCGGCAATACGCAGATTATCGTCCCGCTGAACAACCGTTCGCTTGCCACTTCCGGCGATTACCGTATTTTCCACGTCGATAAAAACGGCAAA‑CGCCTCTCCCACATCATCAATCCcaacaacaa > 2:700691/1‑151 (MQ=255) gTATAGAGCAACCCAATATCATCCAAGGCGGCAAAACGCATATTATCGTCCCGCTGAACAACCGTTCGCTTGCCACTACCGGCGATTAACGTATTTTCCACGACAATAAAAAATGAAAA‑CGCCTCTCCCACATCATCAATCCcaacaacaa > 1:752371/1‑151 (MQ=255) gTATAGACCAACCCAATATCATCCAAGGCGGCAATACGCAGATTATCGACCCGCTGAACAACCGTTCGCTTGCCCCTTCCGGCGATTACCGTAGTTTGCACGTCGGTAAAAACGGCAAA‑CGCCGCGCCCACATCATCAATCCccacaacaa > 2:888400/1‑151 (MQ=255) taGAGCAACCTATTTTCTTCCAAGGCGGAAATTCGCTGATTATCGTCCCGCTGAACAACCGTTCGCTTGCCAGTTCCGGGGATTACCGTATTTTCCACGTCGATAAAAACGGCAAA‑CGCCTCTCCCACATCATAAATCCCAACAACAAACg < 2:1032699/151‑1 (MQ=255) gagCAACCCAATATCATCCAAGGCGGCAATACGCAGATTATCGTCCCGCTGAACAACCGTTCGCTTGCCGCTTCCGGCGATTACCGTATTTTCCACGTCGATAAAAACGGCAAA‑CGCCTCTCCCACATCATCAATCCCAACAACAAACGa > 1:1194612/1‑150 (MQ=255) gagCAACCCAATATCATCCAAGGCGGCAATACGCAGATTATCGTCCCGCTGAACAACCGTTCGCTTGCCACTTCCGGCGATTACCGTATTTTCCACGTCGATAAAAACGGCAAA‑CGCCTCTCCCACATCATCAATCCCAACAACAAACGa > 1:1300196/1‑150 (MQ=255) gagCAACCCAATATCATCCAAGGCGGCAATACGCAGATTATCGTCCCGCTGAACAACCGTTCGCTTGCCACTTCCGGCGATTACCGTATTTTCCACGTCGATAAAAACGGCAAA‑CGCCTCTCCCACATCATCAATCCCAACAACAAACGa > 1:388787/1‑150 (MQ=255) gagCAACCCAATATCATCCAAGGCGGCAATACGCAGATTATCGTCCCGCTGAACAACCGTTCGCTTGCCACTTCCGGCGATTACCGTATTTTCCACGTCGATAAAAACGGCAAA‑CGCCTCTCCCACATCATCAATCCCAACAACAAACGa > 2:845792/1‑150 (MQ=255) gagCAACCCAATATCATCCAAGGCGGCAATACGCAGATTATCGTCCCGCTGAACAACCGTTCGCTTGCCACTTCCGGCGATTACCGTATTTTCCACGTCGATAAAAACGGCAAA‑CGCCACTCCCACATCATCAATCCCAACAACAAACGa > 2:1019866/1‑150 (MQ=255) aCCCAATATCATCCAAGGCGGCAATACGCAGATTATCGTCCCGCTGAACAACCGTTCGCTTGCCACTTCCGGCGATTACCGTATTTTCCACGTCGATAAAAACGGCAAA‑CGCCTCTCCCACATCATCAATCCCAACAACAAACGACCCaa > 1:29286/1‑149 (MQ=255) aCCCAATATCATCCAAGGCGGCAATACGCAGATTATCGTCCCGCTGAACAACCGTTCGCTTGCCACTTCCGGCGATTACCGTATTTTCCACGTCGATAAAAACGGCAAA‑CGCCTCTCCCACATCATCAATCCCAACAACAAACGACCCAt > 1:455880/1‑150 (MQ=255) aCCCAATATCATCCAAGGCGGCAATACGCAGATTATCGTCCCGCTGAACAACCGTTCGCTTGCCACTTCCGGCGATTACCGTATTTTCCACGTCGATAAAAACGGCAAA‑CGCCTCTCCCACATCATCAATCCCAACAACAAACGACCCAt > 1:690436/1‑150 (MQ=255) aCCCAATATCATCCAAGGCGGCAATACGCAGATTATCGTCCCGCTGAACAACCGTTCGCTTGCCACTTCCGGCGATTACCGTATTTTCCACGTCGATAAAAACGGCAAA‑CGCCTCTCCCACATCATCAATCCCAACAACAAACGACCCAt > 1:1272546/1‑150 (MQ=255) aCCCAATATCATCCAAGGCGGCAATACGCAGATTATCGTCCCGCTGAACAACCGTTCGCTTGCCACTTCCGGCGATTACCGTATTTTCCACGTCGATAAAAACGGCAAA‑CGCCTCTCCCACATCATCAATCCCAACAACAAACGACCCAt > 1:364387/1‑150 (MQ=255) aCCCAATATCATCCAAGGCGGCAATACGCAGATTATCGTCCCGCTGAACAACCGTTCGCTTGCCACTTCCGGCGATTACCGTATTTTCCACGTCGATAAAAACGGCAAA‑CGCCTCTCCCACATCATCAATCCCAACAACAAACGACCCAt > 1:29322/1‑150 (MQ=255) aCCCAATATCATCCAAGGCGGCAATACGCAGATTATCGTCCCGCTGAACAACCGTTCGCTTGCCACTTCCGGCGATTACCGTATTTTCCACGTCGATAAAAACGGCAAA‑CGCCTCTCCCACATCATCAATCCCAACAACAAACGACCCAt > 2:368800/1‑150 (MQ=255) atatCATCCAAGGCGGCAATACGCAGATTATCGTCCCGCTGAACAACCGTTCGCTTGCCACTTCCGGCGATTACCGTATTTTCCACGTCGATAAAAACGGCAAA‑CGCCTCTCCCACATCATCAATCCCAACAACAAACGACCCATCAGCca > 2:303870/1‑151 (MQ=255) atatCATCCAAGGCGGCAATACGCAGATTATCGTCCCGCTGAACAACCGTTCGCTTGCCACTTCCGGCGATTACCGTATTTTCCACGTCGATAAAAACGGCAAA‑CGCCTCTCCCACATCATCAATCCCAACAACAAACGACCCATCAGCca > 2:171678/1‑151 (MQ=255) atatCATCCAAGGCGGCAATACGCAGATTATCGTCCCGCTGAACAACCGTTCGCTTGCCACTTCCGGCGATTACCGTATTTTCCACGTCGATAAAAACGGCAAA‑CGCCTCTCCCACATCATCAATCCCAACAACAAACGACCCATCAGCca > 2:303835/1‑151 (MQ=255) atcCAAGGCGGCAATACTCAGATTATCGTCCCGATTAACAACCTTTGGCTTGCCACTTCCGGCGATTACCGTATTTTCCAGGTCTATAAAAACGGCAAA‑CGCCTCTCCCACATCATCAATCCCAACAACAAACGACCCATCAGCCACAAcc < 2:1545837/151‑1 (MQ=255) atcCAAGGCGGCAATACGCAGATTATCGTCCCGCTGAACAACCGTTCGCTTGCCACTTCCGGCGATTACCGTATTTTCCACGTCGATAAAAACGGCAAA‑CTCCTCTCCCACATCATCAATCCCAACAACAAACGACCCATCAGCCACAAc > 1:913544/1‑150 (MQ=255) tgggggcAATACGCAGATTATCGTCCCGCTGAACACCGGTTGGCTTGCCACTTCGGGCTATTACCGTATTTTCCACGTCGATAAAAAGGGCAAA‑CGCCTCTCCCACATCATCAATCCCAACACCAAACGACCCATCAGCCACAACCTCGcc < 2:440408/147‑1 (MQ=255) gcggaAATCCGCTGATTATCGTCCCGTTTAACAACCGTTCGCTTGCCACTTCGGGCTATTACCGTATTTTCCACGTCTATAAAAACGGCAAA‑CGCCTCTCCCACATCATCAATCCCAACAACAAACGACCCATCAGCCACAACCTCGCCt < 2:249852/150‑1 (MQ=255) gcAATACGCAGATTATCGTCCCGCTGAACAACCGTTCGCTTGCCACTTCCGGCGATTACCGTATTTTCCACGTCGATAAAAACGGCAAA‑CGCCTCTCCCACATCATCAATCCCAACAACAAACGACCCATCAGCCACAACCTCGCCTCCAt > 1:499181/1‑151 (MQ=255) cAATACGCATATTATCGTCCCGCTGAACAACCTTTCGATTGCCACTTCCGGCTATTACCGTATTTTCCACTTCTATAAAAACGGCAAA‑CGCCTCTCCCACATCATCAATCCCAACAACAAACGACCCATCAGCCACAACCTCGCCTCCATc < 2:61338/151‑1 (MQ=255) aaatacgaattttATCGTCCCGTTTAAAAACCTTTCGTTTGCCACTCCCGGCTTTTACGTTATTTTCCACTTCTATAAAAA‑GGCAAAACGCCTCTCCCACATCATCAATCCCAACAACAAACGACCCATCAGCCACAACCTCGCCTCCATc < 1:1323016/140‑1 (MQ=255) actaagtttATCGTCCCGCTTAAAACCCGTTGGCTTGCAAATTCGGGCTATTACCTTTTTTTCCACGTGGAAAAAAACGGAAAA‑CGCCTCTCCCACATCATCAATCCCAACAACACACGACCCATCAGCCACAACCTCGCCTCCATCAGCg < 2:258150/144‑1 (MQ=255) aCGCAGATTATCGTCCCGCTGAACAACCGTTCGCTTGCCACTTCCGGCGATTACCGTATTTTCCACGTCGATAAAAACTGCAAA‑CGCCTCTCCCACATCATCAATCCCAACAACAAACGACCCATCAGCCACAACCTCGCCTCCATCAGCg > 2:1056082/1‑151 (MQ=255) aCGCAGATTATCGTCCCGCTGAACAACCGTTCGCTTGCCACTTCCGGCGATTACCGTATTTTCCACGTCGATAAAAACGGCAAA‑CGCCTCTCCCACATCATCAATCCCAACAACAAACGACCCATCAGCCACAACCTCGCCTCCATCAGCg > 1:1477239/1‑151 (MQ=255) aCGCAGATTATCGTCCCGCTGAACAACCGTTCGCTTGCCACTTCCGGCGATAACCGTATTTTCCACGTCGATAAAAACGGCAAA‑CGCCTCTCCCACATCATCAATCCCAACAACACACGACCCATCAGCCACAACCTCGCCTCCATCAGCg < 2:1040707/151‑1 (MQ=255) gCAGATTATCGTCCCGCTGAACAACCGTTCGCTTGCCACTTCCGGCGATTACCGTATTTTCCACGTCGATAAAAACGGCAAA‑CGCCTCTCCCACATCATCAATCCCAACAACAAACGACCCATCAGCCACAACCTCGCCTCCATCAGCGTg > 2:607208/1‑151 (MQ=255) gCAGATTATCGTCCCGCTGAACAACCGTTCGCTTGCCACTTCCGGCGATTACCGTATTTTCCACGTCGATAAAAACGGCAAA‑CGCCTCTCCCACATCATCAATCCCAACAACAAACGACCCATCAGCCACAACCTCGCCTCCATCAGCGTg > 2:607342/1‑151 (MQ=255) ttttATCGTCCCGCTTAAAAACCGTTCGTTTGCCATTTCGGGCTTTTACCTTTTTTTCCACGTCTATAAAACGGGAAAA‑CGCCTCTCCCACATCATCAATCCCAACAACAAACGACCCATCAGCCACAACCTCGCCTCCATCAGCGTGGtc < 1:160169/149‑1 (MQ=255) ctacccgcttcacacccGTTAGCTTGCCACGACCGCCGATTACCTTAATTTCCACGTCGATAAAAACGGCAAA‑CGCCTCCCCCCCATCATCAAGCCCCACAACAAACGCCCCATCAGCCACAACCTCGCCTCCATCAGCGTGGTCTCAGAc < 2:1299990/136‑1 (MQ=255) cgtccggtttaaaaacCGTTCGTTTGCAACTTCCGGCGATTACCTTATTTTCCACGTCTATAAAACCGGAAAA‑CGCCTCTCCCACATCATCAATCCCAACAACAAACGACCCATCAGCCACAACCTCGCCTCCATCAGCGTGGTCTCAGAc < 1:536804/138‑1 (MQ=255) cggcccGCTGACCACCGGTTGGCTTGCCACTCCCGGCTTTTACCTTTTTTTCCACGCCTATAAAACCGCCACC‑CGCCTCTCCCACATCATCAATCCCAACAACAAACGACCCATCAGCCACAACCTCGCCTCCATCAGCGTGGTCTCAGAc < 1:266520/148‑1 (MQ=255) cgccccGCTTAAAAACCGTTCGCTTCCCACTCCGGGCTATTACCTTTTTTACCACGTCTAAAAAAACGCCAAA‑CGCCTCTCCCACAACAAAAATCCCAACAACACACGACCCATCAGCCACAACCTCGCCTCCATCAGCGTGGTCTCAGAc < 1:1011499/148‑1 (MQ=255) cgccccGCTGAACAACCGTTCGCTTGCCACTTCGGGCTATTACCTTTTTTTCCACGTCTATAAAACCGCAAAA‑CGCCTCTCCCACATCATCAACCCCAACAACAAACGACCCATCAGCCACAACCTCGCCTCCATCAGCGTGGTCTCAGAc < 1:234258/148‑1 (MQ=255) cgccccGCTCAACAACCTTTCGTTTGCCACTTCGGGCGTTTACCTTTTTTACCACTTCTATAAAACGGGCAAA‑CGCCTCTCCCACATCATCAATCCCAACAACAAACGACCCATCAGCCACAACCTCGCCTCCATCAGCGTGGTCTCAGAc < 1:1087841/148‑1 (MQ=255) cgccccGCTCAAAAACGGTTGGCTTGCCACTTCGGGTTTTTACCTTTTTTACCACGTCTA‑AAAAACCGCAAAACGCCTCTCCCACATCATAAATCCCAACAACACACGACCCATCAGCCACAACCTCGCCTCCATCAGCGTGGTCTCAGAc < 1:303973/148‑1 (MQ=255) cGTCCCGTTTAACAACGTTTCGTTTGCCATTTCGGGCGTTTACCTTATTTACCACGTCTATAAAACCGGAAAA‑CGCCTCTCCCACATCATCAATCCCAACAACAAACGACCCATCAGCCACAACCTCGCCTCCATCAGCGTGGTCTCAGAc < 1:926064/151‑1 (MQ=255) cGTCCCGTTGAACAACGGTTCGCTTGCCTCTTCCGGCTATTACCGTTTTTTCCACGTCTATAAAAACGGAAAA‑CGCCTCTCCCACATCATCAATCCCAACAACAAACGACCCATCAGCCACAACCTCGCCTCCATCAGCGTGGTCTCAGAc < 2:29278/151‑1 (MQ=255) cGTCCCGTTGAACAACCGTTCGCTTGCAACTTCCGGCGATTACCTTATTTACCACGTCGATAAAACGGGAAAA‑GGCCTCTCCCACATAATCAATCCCAACAACAAACGACCCATAAGCCACAACCTCGCCTCCATCAGCGTGGTCTAAGAc < 2:1172990/151‑1 (MQ=255) cGTCCCGCTTAACAACGGTTCGCTTGCCACTTCCGGCTATTACCTTTTTTTCCACGTCTATAAAAACGGCAAA‑CGCCTCTCCCACATCATCAATCCCAACAACAAACGACCCATCAGCCACAACCTCGCCTCCATCAGCGTGGTCTCAGAc < 1:194680/151‑1 (MQ=255) cGTCCCGCTTAACAACCGTTCGCTTGCCACTTCGGGCTATTACCTTTTTTTCCACGTCGATAAAAACGGCAAA‑CGCCTCTCCCACATCATCAATCCCAACAACAAACGACCCATCAGCCACAACCTCGCCTCCATCAGCGTGGTCTCAGAc < 2:122359/151‑1 (MQ=255) cGTCCCGCTTAACAACCGTTCGCTTGCCACTTCCGGCGATTACCTTATTTTCCACGTCGATAAAAACGCCAAA‑CGCCTCTCCCACATCATCAATCCCAACAACAAACGACCCATCAGCCACAACCTCGCCTCCATCAGCGTGGTCTCAGAc < 2:1300003/151‑1 (MQ=255) cGTCCCGCTTAACAACCGTTCGCTTGCCACTTCCGGCGATTACCGTATTTTCCACGTCGATAAAAACGGAAAA‑CGCCTCTCCCACATCATCAATCCCAACAACAAACGACCCATCAGCCACAACCTCGCCTCCATCAGCGTGGTCTCAGAc < 2:1272136/151‑1 (MQ=255) cGTCCCGCTTAAAAACCGTTCGCTTGCCACTTCCGGCGATTACCTTATTTTCCACGTCTATAAAAACGGCAAA‑CGCCTCTCCCCCATCATCAATCCCAACAACAAACGACCCATCAGCCACAACCTCGCCTCCATCAGCGTGGTCTCAGAc < 2:1299808/151‑1 (MQ=255) cGTCCCGCTGAACACCCGTTCGTTTGCAAGTTCCGGCGTTTACCTTTTTTTCCACTTCTATAAAAACGGAAAA‑CGCCTATCCCACATCATCAATCCCAACAACAAACGACCCATCAGCCACAACCTCGCCTCCATCAGCGTGGTCTCAGAc < 2:1173750/151‑1 (MQ=255) cGTCCCGCTGAACAACGTTTCGCTTGCCACTCCCGGCGTTTACGGTATTTTCCCGGGCTATAAAAAGGGAAAA‑CGCCTCTCCCACATCATCAATCCCAACAACAAACGACCCATCAGCCACAACCTCGCCTCCATCAGCGTGGTCTCAGAc < 1:771058/151‑1 (MQ=255) cGTCCCGCTGAACAACGGTTCGCTTGCCACTTCCGGCTATTACGTTTTTTTCCACTTCGATAAAAACGGCAAA‑CGCCTCTCCCACATCATCAATCCCAACAACAAACGACCCATCAGCCACAACCTCGCCTCCATCAGCGTGGTCTCAGAc < 2:29519/151‑1 (MQ=255) cGTCCCGCTGAACAACCGTTCGCTTGCCACTTCCGGCGATTACCGTATTTTCCACGTCGATAAAAACGGCAAA‑CGCCTCTCCCACATCATCAATCCCAACAACAAACGACCCATCAGCCACAACCTCGCCTCCATCAGCGTGGTCTCAGAc < 2:660014/151‑1 (MQ=255) cGTCCCGCTGAACAACCGTTCGCTTGCCACTTCCGGCGATTACCGTATTTTCCACGTCGATAAAAACGGCAAA‑CGCCTCTCCCACATCATCAATCCCAACAACAAACGACCCATCAGCCACAACCTCGCCTCCATCAGCGTGGTCTCAGAc < 2:555697/151‑1 (MQ=255) cGTCCCGCTGAACAACCGTTCGCTGCCCACTTCCGGCGATTACCGTATTTTCCACGTCGATAAAAACGCCAAA‑CGCCTCTCCCACATCATCAATCCCAACAACAAACGACCCATCAGCCACAACCTCGCCTCCATCAGCGTGGTCTCAGAc < 1:1327656/151‑1 (MQ=255) cGTCCCGCTGAACAACCGTTCGATTGCCACTTCCGGCGATTACCTTATTTACCACGTCGATAAAAACGGAAAA‑CGCCTCTCCCACATCATCAATCCCAACAACAAACGACCCATCAGCCACAACCTCGCCTCCATCAGCGTGGTCTCAGAc < 2:426874/151‑1 (MQ=255) cGTCCCGCTGAAAAACGGTTCGCTTGCCACTTCCGGCTATTACCGTTTTTTCCACGTCTATAAAAACGGCAAA‑CGCCTCTCCCACATCATCAATCCCAACAACAAACGACCCATCAGCCACAACCTCGCCTCCATCAGCGTGGTCTCAGAc < 2:675235/151‑1 (MQ=255) cGTCCCGCTCAACAACCGTTCGCTTGCCACTTCCGGCGATTCCCGTATTTTCCACGTCTATAAAACCGGCACA‑CGCCTCTCCCACATCATCAATCCCACCAACAAACGACCCATCAGCCACAACCTCGCCTCCATCAGCGTGGTCTCAGAc < 2:418606/151‑1 (MQ=255) cGTCCCGCTCAACAACCGTCCGCTTGCAACTTCCGGCTTTTACCGTATTTTCCACGTCTATAAAAACGCAAAA‑CGCCTCTCCCACATCATCAATCCCAACAACACACGACCCATCAGCCACAACCTCGCCTCCATCAGCGTGGTCTCAGAc < 1:1573931/151‑1 (MQ=255) cGTCCCGCGTAACAACCGTTCGGTTGCCACTTCCGGCGATTACCGTTTTTTCCACGGCTATAAAAACGGCAAA‑CGCCTCTCCAACATCATCAATCCCAACAACAAACGACCCATCAGCCACAAGCTCGCCTCCATCAGCGTGGTCTCAGAc < 2:555667/151‑1 (MQ=255) cGTCCCGATGAACAACGGTTCGCTTGCCACTTCGGGCGATTACCTTATTTACCACGTCTATAAAAACGGCAAA‑CGCCTCTCCCACATCATCAATCCCAACAACAAACGACCCATCAGCCACAACCTCGCCTCCATCAGCGTGGTCTCAGAc < 2:940357/151‑1 (MQ=255) cGTCCCGATGAACAACCTTTCGCTTGCCACTTCCGGCTATTACCGTTTTTTCCACGTCTATAAAAACGGCAAA‑CGCCTCTCCCACATCATCAATCCCAACAACAAACGACCCATCAGCCACAACCTCGCCTCCATCAGCGTGGTCTCAGAc < 2:1503848/151‑1 (MQ=255) gacccGGTGAACAACCGTTCGCTGGCCACTTCGGGCTTTTACGTTTTTTTCAACTACTATAAAAACGGAAAA‑CGCATCCCCCACATAATCAACCCCAACAACAAACGACCCATCAGCCACAACCTCGCCTCCATCAGCGTGGTCTCAGAc < 1:1379514/148‑1 (MQ=255) gTCCGGCTTAACAACGGTTCGCTTGCCACTTCGGGCTTTTACCTTTTTTTCCACGTCTAAAAAAACGCCAAA‑CGCCTCTCCCACATCATAAACCCCACCAACACACGACCCATCAGCCACAACCTCGCCTCCATCAGCGTGGTCTCAGAc < 1:152823/150‑1 (MQ=255) cGCTTAACCACCGTTCGCTTGCCACTTCGGGCTATTACCGTATTTTCCACGTCTATAAAAAGGGAAAA‑CGCCTCTCCCACATCATCAATCCCAACAACAAACGACCCATCAGCCACAACCTCGCCTCCATCAGCGTGGTCTCAGACAGTGc < 2:1200192/151‑1 (MQ=255) cTGAACAACCGTTCGCTTGCCACTTCCGGCGATTACCGTATTTTCCACGTCGATAAAAACGGCAAA‑CGCCTCTCCCACATCATCAATCCCAACAACAAACGACCCATCAGCCACAACCTCGCCTCCATCAGCGTGGTCTCAGACAGTGCaa > 1:1660679/1‑151 (MQ=255) gAACAACCGTTCGCTTGCCACTTCCGGCGATTACCGTATTTTCCACGTCGATAAAAACGGCAAA‑CGCCTCTCCCACATCATCAATCCCAACAACAAACGACCCATCAGCCACAACCTCGCCTCCATCAGCGTGGTCTCAGACAGTGCAATg > 2:1168210/1‑151 (MQ=255) aacaccCGTTCGTTTGCCACTTCCGGCTATTACCGTTTTTTCCACGTCTATAAAAACGCAAAA‑CGCCTCTCCCACATCATCAATCCCAACAACACACGACCCATCAGCCACAACCTCGCCTCCATCAGCGTGGTCTCAGACAGTGCAATGa < 1:607524/151‑1 (MQ=255) aacaacCGTTCGTTTGCCACTTCGGGCTATTACCGTATTTTCCACGTCTATAAAAACGGCAAA‑CGCCTCTCCCACATCATCAATCCCAACAACAAACGACCCATCAGCCACAACCTCGCCTCCATCAGCGTGGTCTCAGACAGTGCAATGa < 1:607385/151‑1 (MQ=255) aacaacCGTTCGCTTGCCACTTCCGGCTATTACCTTTTTTTCCACGTCTATAAAAACGGCAAA‑CGCCTCTCCCACATCATCAATCCCAACAACAAACGACCCATCAGCCACAACCTCGCCTCCATCAGCGTGGTCTCAGACAGTGCAATGa < 2:1194185/151‑1 (MQ=255) cgggCGTTTACGGTATTTTCCATGTCGAAAAAACCGGCAAA‑CGCCTCTCCCACATCATCAAACCCAACAACACACGACCCATCAGCCACAACCTCGCCTCCATCAGCGTGGTCTCAGACAGTGCAATGACGGCGGACGGTTTATCCACAgg < 1:1226660/149‑1 (MQ=255) cGATTACCGTATTTTCCACGTCGATAAAAACGGCAAA‑CGCCTCTCCCACATCATCAATCCCAACAACAAACGACCCATCAGCCACAACCTCGCCTCCATCAGCGTGGTCTCAGACAGTGCAATGACGGCGGACGGTTTATCCACAGGatta > 1:418537/1‑151 (MQ=255) cGATTACCGTATTTTCCACGTCGATAAAAACGGCAAA‑CGCCTCTCCCACATCATCAATCCCAACAACAAACGACCCATCAGCCACAACCTCGCCTCCATCAGCGTGGTCTCAGACAGTGCAATGACGGCGGACGGTTTATCCACAGGatta > 2:1438328/1‑151 (MQ=255) ttacctttttttCCACGTCTATAAAAACGGAAAA‑CGCCTCTCCCACATCATCAATCCCAACAACAAACGACCCATCAGCCACAACCTCGCCTCCATCAGCGTGGTCTCAGACAGTGCAATGACGGCGGACGGTTTATCCACAGGATTAttt < 1:1457980/143‑1 (MQ=255) | AATGCGCACGGCGAACCGTGGCGCATCGGTATAGAGCAACCCAATATCATCCAAGGCGGCAATACGCAGATTATCGTCCCGCTGAACAACCGTTCGCTTGCCACTTCCGGCGATTACCGTATTTTCCACGTCGATAAAAACGGCAAA‑CGCCTCTCCCACATCATCAATCCCAACAACAAACGACCCATCAGCCACAACCTCGCCTCCATCAGCGTGGTCTCAGACAGTGCAATGACGGCGGACGGTTTATCCACAGGATTATTTGTTTTAGGC > Exported/1383752‑1384024 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |