| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | Exported | 1,887,943 | 0 | A | G | 30.7% | 399.5 / 221.5 | 246 | intergenic (‑326/+255) | BCHEFKBB_01931/BCHEFKBB_01932 | GIY‑YIG nuclease [NGO_1911]/pilus assembly protein [NGO_10270] |
| Reads supporting (aligned to +/- strand): ref base A (63/102); new base G (14/59); total (78/168) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.19e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.80e-01 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 249 total aligned reads displayed.
CACCGACAGACCCGGATTCCCGCCTGAGCGGGAATGACGGCGGAGCGGTTTCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAA‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGATAATCTTTGAATATTGCTGTTGTCCCACGTCCTAGATTCCCGCCTGCGCG > Exported/1887793‑1888093 | cACCGACAGACCCGGATTCCCGCCTGAGCCGGAATGACGGCGGAGCGGTTTCTGTTTTTTCCGATAAATTACTTAAACTCAAAATTTCATCATTCCTTCAAAAACAGAAAACCAAAATCAGAAACCTAAAAACCCGTCATTTCCACGACaa > 2:837454/1‑151 (MQ=21) tgtctagagtCCCGCCTGCGCGGGAATGACGGCGGAGCGGTTTCTGATTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTCCCACGAAAG‑TGGGAATc < 1:1189433/142‑1 (MQ=17) gACCCGGATTCCCGCCTGAGCGGGAATGACGGCGGAGCGGTTTCTGGTTTTTACGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATAAGAAACCTAAAATCCCGTCATTTCCACGACAA‑TGGGAAt > 1:1337641/1‑150 (MQ=255) aCCCGGTTTCCCGCCTGAGCGGGAATGACGGCGGAGCGGTTTCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAA‑TGGGAATcc < 1:969754/151‑1 (MQ=255) aCCCGGATTCCCGCCTGAGCGGGAATGACGGCGGAGCGGTTTCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAA‑Tgggcg < 2:64912/148‑3 (MQ=255) aCCCGGATTCCCGCCTGAGCGGGAATGACGGCGGAGCGGTTTCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAA‑TGGGaa < 1:1260760/148‑1 (MQ=255) aCCCGGATTCCCGCCTGAGCGGGAATGACGGCGGAGCGGTTTCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAA‑TGGGAATcc < 1:1299575/151‑1 (MQ=255) aCCCGGATTCCCGCCTGAGCGGGAATGACGGCGGAGCGGTTTCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCACCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAA‑TGGGAATcc < 2:1240592/151‑1 (MQ=255) aCCCGGATACCCGCCTGAGCGGGAATGACGGCGGAGCGGTTTCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAA‑TGGGAATcc < 1:1372169/151‑1 (MQ=255) cccGGATTCCCGCCTGAGCGGGAATGACGGCGGAGCGGTTTCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTGCACGACAA‑TGGGAATCCg > 2:1281492/1‑151 (MQ=255) cccGGATTCCCGCCTGAGCGGGAATGACGGCGGAGCGGTTTCTGTTTTTTACCATAAATTCCAAAAACTCAAAATTTCATAAATCCTACAAAAACAGAAAAACAAAATCAGAAACCTAAAATCCCGGCATTTACACGACAA‑TGGGAATCCg > 1:304009/1‑151 (MQ=21) cccGGATTCCCGCCTGAGCGGGAATGACGGCGGAGCGGTTTATGTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAAAAGAAAACCAAAATCAGAAGCCTAAAATCCCGTCATTTACACGACAA‑TGGGAATCCg > 1:66404/1‑151 (MQ=21) aTTCCCGCCTGAGCGGGAATGACGGCGGAGCGGTTTCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCCTCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAA‑TGGGAAGCCGgttcg > 1:1248465/1‑151 (MQ=255) aTTCCCGCCTGAGCGGGAATGACGGCGGAGCGGTTTCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAA‑TGGGAATcc < 2:1186407/145‑1 (MQ=255) cccGCCTGCGGGGGAATGACGGCGGAGCGGTTTCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTCCCACGAAAG‑TGGGAATCCGgttcgttc < 1:1008432/151‑1 (MQ=17) cccGCCTGAGCGGGAATGACGGCGGAGCGGTTTCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAA‑TGGGAATCCGgttcgttc < 1:774676/151‑1 (MQ=255) cccGCCTGAGCGGGAATGACGGCGGAGCGGTTTCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAA‑TGGGAATCCGgttcgttc < 1:306352/151‑1 (MQ=255) ccccggcgcgttaaTGCCGGCGGAGCGGTTTCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTCCCACGAAAG‑TGGGAATCCGGTTCGTTCgg < 1:952422/139‑1 (MQ=18) ctgcgCGGGAATGACGGCGGAGCGGTTTCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCAGTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTCCCACGAAAG‑TGGGAATCCGGTTCGTTCGGttt < 2:312915/147‑1 (MQ=18) ctgcgCGGGAATGACGGCGGAGCGGTTTCTGTTTTTTCCGATAAATTCCTAAAACACAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTCCCACGAAAG‑TGGGAATCCGGTTCGTTCGGttt < 1:1365496/147‑1 (MQ=18) cTGAGCGGGAATGACGGCGGAGCGGTTTCTGTTTTTTCCTATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAA‑TGGGAATCCGGTTCGTTCGGttt < 2:1100669/151‑1 (MQ=255) cTGAGCGGGAATGACGGCGGAGCGGTTTCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCACAAACCTAAAATCCCGTCATTTCCACGACAA‑TGGGAATCCGGTTCGTTCGGttt < 2:559001/151‑1 (MQ=255) gcgCGGGAATGACGGCGGAGCGGTTTCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATATCATAATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTCCCACGAAAG‑TGGGAATCCGGTTGGTTCGGtttag > 2:868897/3‑149 (MQ=18) ggAATGACGGCGGAGCGGTTTCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAA‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGt > 2:1032739/1‑151 (MQ=255) actGACGGCGGAGCGGTTTCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTCCCACGAAAG‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGttt < 1:899628/149‑1 (MQ=255) aatcaCGGCGGAGCGGTTTCTGTTTTTTCCGATAAATTCCTAAAACTCATAATTACATCATTCCGACAAAAACAGAAAACCAAAAACAGAAACCTAAATTCCCGACATACCCACGAAAG‑TGGGAATCCGTTTAGTTCGGGTTCGCGTGttt > 2:821903/5‑151 (MQ=9) aCGGCGGAGCGGTTTCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTCCCACGAAAG‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAg < 1:579476/151‑1 (MQ=255) cggcggAGCGGTTTCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAA‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGt < 1:575698/151‑1 (MQ=255) cggcggAGCGGTTTCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAA‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGt < 1:999084/151‑1 (MQ=255) gcggAGCGGTTTCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTCCCACGACAG‑TGGGAATCCGGTTCGTTCGGTGTCGCTTGGTTTAAGttt > 2:198818/1‑151 (MQ=21) ggTTTCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAA‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTaa > 2:36438/1‑151 (MQ=255) ggTTTCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTCCCACGAAAG‑TGGGAATCCgg < 2:51912/116‑1 (MQ=18) ggTTTCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTCCCACGAAAG‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTaa > 2:1213779/1‑151 (MQ=255) gTTTCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAA‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTaa > 1:1034544/1‑150 (MQ=255) tttCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAA‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTaagt > 2:403187/1‑149 (MQ=255) ttCTGTTATTTCCGATAAATACCTACAACTCACAAGTTCATCATCCCTACAACAACAGAAAACCAAAATCAGACCCCTAAAATCCCGACATTTCCACGCCAA‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACtt < 2:657344/151‑1 (MQ=255) tCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAA‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTc < 2:1168461/151‑1 (MQ=255) tCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAA‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTc < 1:403310/151‑1 (MQ=255) tCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAA‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTc < 1:402690/151‑1 (MQ=255) tCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTCCCACGAAAG‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTc < 1:1227147/151‑1 (MQ=255) tCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTCCCACGAAAG‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTc < 1:621812/151‑1 (MQ=255) tCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTCCCACGAAAG‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTc < 2:770424/151‑1 (MQ=255) ttttttCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAA‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCAc < 2:888789/150‑1 (MQ=255) ttttttCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAA‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCAc < 2:596978/150‑1 (MQ=255) ttttttCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTCCCACGAAAG‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCAc < 2:188777/150‑1 (MQ=255) ttatttCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTCCCACGAAAG‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCAc < 2:1068913/147‑1 (MQ=25) tttttactaTAAATTACTAAAACTCAATATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACATAAAATCCCGTCATTCCCACGAAAG‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACtt < 1:362647/143‑1 (MQ=21) tttttCCGATAAATTCCTAACACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAA‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACtt < 2:292750/151‑1 (MQ=255) tttttCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAA‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACtt < 2:524263/151‑1 (MQ=255) tttttCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTCCCACGAAAG‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACtt < 2:665465/151‑1 (MQ=255) tttttCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTCCCACGAAAG‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACtt < 1:819604/151‑1 (MQ=255) tttttCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTCCCACGAAAG‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACtt < 2:351709/151‑1 (MQ=255) ttCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTCCCACGAAAG‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGt < 1:236211/151‑1 (MQ=255) aTAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTCCCACGAAAG‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTc < 1:127150/151‑1 (MQ=255) aTAAATTCCTAAAAATCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAA‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTc < 1:527986/151‑1 (MQ=255) tAAATTCCTAAACCTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAACTCAGAAACCTAAAATCCCGTCATTCCCACG‑CAAGTGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACGTCCACTTCGTCATTcc < 2:25305/151‑1 (MQ=25) tAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTCCCACGAAAG‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTcc < 1:268090/151‑1 (MQ=255) tCCTAAAACTCAAAATTTCATCAGTCCTACAAAAACAGAAAACCAAACTCAGACACCTAAAATCCCGTCATTCCCACGAAAG‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTcccgcgc < 2:912211/151‑5 (MQ=25) tAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAA‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAg < 2:70597/151‑1 (MQ=255) aaaaCTCAAAATGTCATCATTCCTACAAAAACAGAAAACCAAAATCAGACACCTAAAATCCCGTCATTTCCACGACAA‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGt < 2:1064147/151‑1 (MQ=255) cTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTCCCACGAAAG‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTcccgcgcaggcggga > 2:256651/1‑139 (MQ=25) aaaTTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTCCCACGAAAG‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCGCGCAGGCGGGAATcc < 1:85627/151‑1 (MQ=21) tcatcaTTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGACATTTCCACGACAA‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTATCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAAt < 2:1337273/151‑1 (MQ=255) atcatTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAA‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATcc < 2:805984/151‑1 (MQ=255) tCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAA‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGAc < 1:972144/151‑1 (MQ=255) cTACAAAAACAGAAAACCAAAATCAGACAACTAAAATCCCGTCATTTCCACGACAA‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCGCGAAAGTGGGAATCCAGAATCCCGGACtt > 2:167777/1‑151 (MQ=255) tACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAA‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGACttt > 1:1135211/1‑151 (MQ=255) cAAAATCAGAAACCTCCAATCCCGTCATTTCCACGACAC‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGATCATCTTTGAat < 2:277700/151‑1 (MQ=38) cAAAATCAGAAACCTAAACTCCCGTCAGTTCCACGACAA‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGATAATCTTTGAat < 2:1367278/151‑1 (MQ=255) cAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAA‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGATAATCTTTGAat < 1:1198304/151‑1 (MQ=255) cAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAA‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGATAATCTTTGAat < 1:1277433/151‑1 (MQ=255) aaCCTAAAATCCCGTCATTTCCACGACAA‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGATAATCTTTGAATATTGCtgttg < 1:51859/151‑1 (MQ=255) aCCTAAAATCCCGTCATTTCCACGACAA‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGATAATCTTTGAATATTGCtgttgt > 1:1125192/1‑151 (MQ=255) ccTAAAATCCCGTCATTTCCACGACAA‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGATAATCTTTGAATATTGCtgttgt > 1:1366311/1‑150 (MQ=255) ccTAAAATCCCGTCATTTCCACGACAA‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGATAATCTTTGAATATTGCtgttgt > 1:1073993/1‑150 (MQ=255) ccTAAAATCCCGTCATTTCCACGACAA‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGATAATCTTTGAATATTGCtgttgt > 1:1232571/1‑150 (MQ=255) cTAAAATCCCGTCATTTCCACGACAA‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGATAATCTTTGAATATTGCTGTTGTcc < 2:959886/151‑1 (MQ=255) cTAAAATCCCGTCATTTCCACGACAA‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGATAATCTTTGAATATTGCTGTTGTcc < 1:784063/151‑1 (MQ=255) cTAAAATCCCGTCATTTCCACGACAA‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCAGTCCCACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGATAATCTTTGAATATTGCTGTTGTcc < 1:472079/151‑1 (MQ=255) cTAAAATCCCGTCAATTCCACGACAA‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGATAATCTTTGAATATTGCTGTTGTcc < 2:432042/151‑1 (MQ=255) tAAAATCCCGTCATTTCCACGACAA‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGATAATCTTTGAATATTGCTGTTGTccc < 1:835440/151‑1 (MQ=255) aaaaTCCCGTCATTTCCACGACAA‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGATAATCTTTGAATATTGCTGTTGTCCCa < 1:1311439/151‑1 (MQ=255) aaaaTCCCGTCATTTCCACGACAA‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGATAATCTTTGAATATTGCTGTTGTCCCa < 2:774872/151‑1 (MQ=255) aTCCCGTCATTTCCACGACAA‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGATAATCTTTGAATATTGCTGTTGTCCCACGt < 2:496431/151‑1 (MQ=255) aTCCCGTCATTTCCACGACAA‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGATAATCTTTGAATATTGCTGTTGTCCCACGt > 2:633965/1‑151 (MQ=255) aTCCCGTCATTTCCACGACAA‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGATAATCTTTGAATATTGCTGTTGTCCCACGt < 1:539058/151‑1 (MQ=255) tCCCGTCATTTCCACGACAA‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGATAATCTTTGAATATTGCTGTTGTCCCACGTc < 1:185261/151‑1 (MQ=255) tCATTTCCACGACAA‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGATAATCTTTGAATATTGCTGTTGTCCCACGTCCTAGa > 1:1019329/1‑151 (MQ=255) cATTTCCACGACAC‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGATAATCTTTGAATATTGCTGTTGTCCCACGTCCTAGAt < 1:155256/151‑1 (MQ=255) tttCCACGACAA‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGATAATCTTTGAATATTGCTGTTGTCCCACGTCCTAGAtt > 1:354312/1‑150 (MQ=255) ttCCACGACAA‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGATAATCTTTGAATATTGCTGTTGTCCCACGTCCTAGATTcc < 2:147459/151‑1 (MQ=255) ttCCACGACAA‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGATAATCTTTGAATATTGCTGTTGTCCCACGTCCTAGATTc > 2:889137/1‑150 (MQ=255) aCGACAA‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGATAATCTTTGAATATTGCTGTTGTCCCACGTCCTAGATTCCCGcc < 1:920468/151‑1 (MQ=255) aCGACAA‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGATAATCTTTGAATATTGCTGTTGTCCCACGTCCTAGATTCCCGcc < 2:1237743/151‑1 (MQ=255) aCGACAA‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGATAATCTTTGAATATTGCTGTTGTCCCACGTCCTAGATTCCCGcc < 2:303921/151‑1 (MQ=255) aCGACAA‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGATAATCTTTGAATATTGCTGTTGTCCCACGTCCTAGATTCCCGcc < 1:1185609/151‑1 (MQ=255) cGACAA‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGATAATCTTTGAATATTGCTGTTGTCCCACGTCCTAGATTCCCGc > 2:744015/1‑149 (MQ=255) cGACAA‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGATAATCTTTGAATATTGCTGTTGTCCCACGTCCTAGATTCCCGc > 2:744094/1‑149 (MQ=255) a‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGATAATCTTTGAATATTGCTGTTGTCCCACGTCCTAGATTCCCGCCTGcgcg > 2:621119/1‑151 (MQ=255) a‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGATAATCTTTGAATATTGCTGTTGTCCCACGTCCTAGATTCCCGCCTGcgcg > 2:548697/1‑151 (MQ=255) | CACCGACAGACCCGGATTCCCGCCTGAGCGGGAATGACGGCGGAGCGGTTTCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAA‑TGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGATAATCTTTGAATATTGCTGTTGTCCCACGTCCTAGATTCCCGCCTGCGCG > Exported/1887793‑1888093 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |