| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | Exported | 107,056 | 0 | A | T | 24.7% | 355.3 / 50.6 | 186 | L44Q (CTG→CAG) | BCHEFKBB_00094 | pilus assembly protein PilP [NGO_0097] |
| Reads supporting (aligned to +/- strand): ref base A (84/56); new base T (0/46); total (84/102) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.45e-15 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 195 total aligned reads displayed.
CTCCTCGATTTTGTTTTTCTTAATCAGGAAGGCATCTTTTTCCTGTTTGAGCTTTTGTATTTCCGACAGCTCGGTATCCAAGTGTGCGATGGAGATTTCCAGCAGCGTGTTTTTTTCCGACTGTTTATTG‑ATCATATTG‑TCGATAAACAGGTAGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTGCGTTTGTTCATCTCTTCCCTGTAGGGGAGGAGGTTGATTTTGATTAAATTGTTCATAATTATAATCCCCGTACCG > Exported/106908‑107205 | ctcctcGATTTTGTTTTTCTTAATCAGGAAGGCATCTTTTTCCTGTTTGAGCTTTTGTATTTCCGACAGCTCGGTATCCAAGTGTGCGATGGAGATTTCCAGCAGCGTGTTTTTTTCCGACTGTTTATTG‑ATCATATTG‑TCGATAAACagg < 1:22028/151‑1 (MQ=255) tcGATTTTGTTTTTCTTAATCAGGAAGGCATCTTTTTCCTGTTTGAGCTTTTGTATTTCCGACAGCTCGGTATCCAAGTGTGCGATGGAGATTTCCAGCAGCGTGTTTTTTTCCGACTGTTTATTG‑ATCATATTG‑TCGATAAACaggtagg < 1:1795378/151‑1 (MQ=255) cGATTTTGTTTTTCTTAATCAGGAAGGCATCTTTTTCCTGTTTGAGCTTTTGTATTTCCGACAGCTCGGTATCCAAGTGTGCGATGGAGATTTCCAGCAGCGTGTTTTTTTCCGACTGTTTATTG‑ATCATATTG‑TCGATAAACaggtaggt < 1:1185225/151‑1 (MQ=255) cGATTTTGTTTTTCTTAATCAGGAAGGCATCTTTTTCCTGTTTGAGCTTTTGTATTTCCGACAGCTCGGTATCCAAGTGTGCGATGGAGATTTCCAGCAGCGTGTTTTTTTCCGACTGTTTATTG‑ATCATATTG‑TCGATAAACaggtaggt < 2:1299407/151‑1 (MQ=255) aTTTTGTTTTTCTTAATCAGGAAGGCATCTTTTTCCTGTTTGAGCTTTTGTATTTCCGACAGCTCGGTATCCAAGTGTGCGATGGAGATTTCCAGCAGCGTGTTTTTTTCCGACTGTTTATTG‑ATCATATTG‑TCGATAAACAGGTAGGtt < 1:1950643/150‑1 (MQ=255) aTTTTGTTTTTCTTAATCAGGAAGGCATCTTTTTCCTGTTTGAGCTTTTGTATTTCCGACAGCTCGGTATCCAAGTGTGCGATGGAGATTTCCAGCAGCGTGTTTTTTTCCGACTGTTTATTG‑ATCATATTG‑TCGATAAACAGGTAGGTTg < 1:644694/151‑1 (MQ=255) gatggaatttttttCCTTTTTGAGTTTTTGTTTTTCCGACAGCTGGTTATCCTTGTGTGCTTTGGATTTTTCCAGCTGGGTGTTTTTTTCCGACTGTTTTTTG‑ATAATATTG‑TCGATAAACTGGTTGGTTGCCGAAACGGCGGCAACGcc < 1:1064710/141‑1 (MQ=255) ggCATCTTTTTCCTGTTTGAGCTTTTGTATTTCCGACAGCTCGGTATCCAAGTGTGCGATGGAGATTTCCAGCAGCGTGTTTTTTTCCGACTGTTTATTG‑ATCATATTG‑TCGATAAACAGGTAGGTTGCCGCAACGGCGGCAACGCCCGt > 2:109116/1‑150 (MQ=255) ctgttcccTGTTTCAGCTCTGGTCTTACCGACCGCTCGGTATCCAAGTGTGCGTTGGTGATTTCCAGCTGCGGGTTTTGTTCCGACTTTTTTTTG‑ATCATTTTT‑TCGATAAACAGTTTGGTGGCCGCAAGGGCGGCAACGCCCGTCAGCAc < 2:1072335/145‑1 (MQ=255) cTTTTTCCTGTTTGAGTTTTTGTATTTCCGACAGCTCGGTATCCAAGTGTGCTATGGAGATTTCCAGCAGCGTGTTTTTTTCCGACTGTTTATTG‑ATCATATTG‑TCGATAAACTGGTAGGTTGCCGAAACGGCGGCAACGCCCGTCAGCAc < 2:1597093/151‑1 (MQ=255) cTTTTTCCTGTTTGAGCTTTTTTATTACCGCCTGCTCGTTACCCATGTGTGCTTTGTATTTTTCCAGCTG‑GTTTTTTTTTCCCTCTTTTTTTTTTATCTTATTG‑TCTATAAAAAGGTTGGTTGCCGAAACGGCGGCAACGCCCGTCAGCAc < 1:737388/151‑1 (MQ=255) cTTTTTCCTGTTTGAGCTTTTGTATTTCCGACTGCTCGGTATCCAAGTGTGCGATTGAGATTTCCAGCAGCGTGTTTTTTTCCGACTGTTTATTG‑ATCATATTG‑TGGATAAACTGGTAGGTTGCCGCAACGGCGGCAACGCCCGTCAGCAc < 2:235205/151‑1 (MQ=255) cTTTTTCCTGTTGTCGCTTTTGTTTTTCCGACAGCTCGGTATCAAAGTGTGCGATGTAGATTTCCAGCAGCGTGTTTTTTTCCGAATGTTTATTG‑ATCCTATTG‑GGTATAAAAAGGTAGGTTGCCGCAACGGCGGCAACGCCCGTCAGCAc < 2:806901/151‑1 (MQ=255) tCCTTTTTGAGTTTTTTTTTTCCCGACAGCTCGTTAACCAAGTGTGCGATGGAGTTTACCAGCAGCTTTTTTTTTTCCGACTGTTTTTTT‑ATCATTTTG‑TCTAAAAACTGTTTGGTTGCCGAAACGGGGGCAACGCCCGTCAGCACGgcgc < 1:368524/151‑1 (MQ=255) tCCTGTTTGCGCTTTTTTATTCCCCACAGCTGGTTATCCATGTGTGCGTTGTATATATCCCGCTGGGTGTTTTTTCCCGACTTTTTTTTC‑ATCATTTGG‑TATTTAAACTGTTTGGTGGCCGCACCGGCGGCAACGCCCGTCAGCACGgcgc < 1:1299174/151‑1 (MQ=255) tCCTGTTTGAGCTTTTGTATTTCCGACAGCTCGGTATCCAAGTGTGCTATGGAGATTTCCAGCAGCGTGTTTTTTTCCGACTGTTTATTG‑ATCATATTG‑TCGATAAACAGGTAGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGgcgc < 2:732901/151‑1 (MQ=255) ccctttttgctcTTTTGTATTTCCCACAGCTCGGTATCCAAGTGTGCTATGTATATTACCAGCAGCTTGTTTTTTACCGACTTTTTATTT‑ATCATTTGG‑TCGATAAACTGTTTGGTTGCCGCACCGGCGCCAACGCCCGTCAGCACGgcgc < 1:272872/140‑1 (MQ=255) ccTGTTTGTGCTTTTGTAGTTCCGACAGCCCGTTATCCAAGTGTGCTTTGGAGTTTTCCAGCAGCGTGTTTTTTTCCGCCTGTTTTTTG‑ATCATCTTG‑TCGATAAACAGGTAGGTTGCCGCACCGGCGGCAACGCCCGTCAGCACGgcgc < 2:1422869/150‑1 (MQ=255) ttttcgCTTTTGTTTTTCCGAACGCTCGGTTTCCAAGTTTGCGATGGAGTTTTCCAGCAGCGTTTTTTTTTCCTACTGTTTATTG‑TTCATTTTG‑TCGATAAACAGGTAGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTAc < 2:1828597/146‑1 (MQ=255) tttgcgcttgggTATTCCCGCCAGCGCGGTATCCACGTGTGCGATGGAGATTTCCAGCAGCGTGTTTTTTTCCGACTGTTTATTG‑ATCATATGG‑TCGATAAACAGGTAGGTTGCCGCACCGGCGGCAACGCCCGTCAGCACGGCGCCGTAc < 2:100385/140‑1 (MQ=255) tttGAGCTTTTTTATTGCCGACAGCTCGGTATCCAAGTGTGCGAGGGAGATTTCCAGCAGCGTTTTTTTTTCCGCCTGTTTATTG‑AACATATTG‑TCGATAAACAGGTAGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTAc < 2:1329440/151‑1 (MQ=255) tttGAGCTTTTGTATTTCCGACAGCTCGGTATCCAAGTGTGCGATGGAGATTTCCAGCAGCGTGTTTTTTTCCGACTGTTTATTG‑ATCATTTTG‑TCGATAAACAGGTCGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTAc < 2:1470960/151‑1 (MQ=255) tGAGCTTTTGAATTTCCGACAGCTCGGTATCCAAGTGTGCGATGGAGATTTCCAGCAGCGTGTTTTTTTCCGACTGTTTATTG‑ATCATATTG‑CCGATAAACAGGTAGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACAt < 2:1782066/151‑1 (MQ=255) aGCTTTTGTATTTCCGACAGCTCGGTATCCAAGTGTGCGATGGAGATTTCCAGCAGGGTGTTTTTTTCCGACTGTTTATTG‑ATCATTTGG‑TCGATAAACAGGTAGGTTGCCGCAAGGGCGGCAACGCCCGTCAGCACGGCGCCGTACATc < 2:556622/150‑1 (MQ=255) cTTTTTTATTTCCGACAGCTCGTTATCAATGTGTGCTATGTATTTTTCCAGCAGCTTTTTTTTTTCCGATTTTTTTTTT‑AAAATATTG‑TCTATAAACTGGTTGGTTGCCGAACCGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAg < 1:479339/150‑1 (MQ=255) cTTTTGTTTTCCCGACAGCTCGGTATCCATGTGTGCGTTGGATTTTTCCAGCTGGGTGTTTTTTTCCGACTTTTTATTG‑ATCATTTTG‑TCTATAAAATGGTTGGTTGCCGCACGGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAg < 1:1930655/150‑1 (MQ=255) cTTTTGTCTTCCCGACCGCTCGGTATCCATGTGTGCGTTGGTGAGTCCCAGCTGGGTGTTTTTTTCCGAGTTTTTTTTT‑ATCATTTTG‑TCTATAAACTGTTTGGTTGCCGCCCGGGCGGCCACGCCCGTCAGCACGGCGCCGTACATCAg < 1:1044686/150‑1 (MQ=255) cTTTTGTATTTCCGACTGCTCGGTATCCATGTGTGCGATGGAGATTTCCAGCAGCGTGTTTTTTTCCTACTGTTTATTG‑ATCATATTG‑TCGATAAACAGGTAGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAg < 2:1822753/150‑1 (MQ=255) cTTTTGTATTTCCGACCGCTCGGTATCCCTGTGTGCTTTGGATATTCCAAGCAGGGTGTTTTTTCCCGACTGTTTATTG‑AT‑ATTTTGGCCTAAAAATTGTTTGGTTGCCGCAAGGGCGGCCACGCCCGTCAGCACGGCGCCGTACATCAg < 1:1245454/150‑1 (MQ=255) cTTTTGTATTACCGACAGCTCGGTATCCAAGTGTGCGATGGCTATTTCCAGCAGCGTGTTTTTTTCCGACTGTTTTTTG‑ATCATATTG‑CCGATAAACTGGTAGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAg < 2:205517/150‑1 (MQ=255) aTTTCCGACAGCTCGGTATCCAAGTGTGCGATGGAGATTTCCAGCAGCGTGTTTTTTTCCGACTGTTTATTG‑ATCATATTG‑TCGATAAACAGGTAGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTaa > 1:1242267/1‑151 (MQ=255) aTTTCCGACAGCTCGGTATCCAAGTGTGCGATGGAGATTTCCAGCAGCGTGTTTTTTTCCGACTGTTTAGTG‑ATCATATTG‑TCGATAAACAGGTAGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTGTTaa > 2:1639783/1‑151 (MQ=255) ctCCGACAGCTCGGTATCCACGTGTGCGATGGAGATTTCCACCCGCGTTTTTTTTCCCGCCTTTTTATTC‑ATCATATTG‑TCTAAAAACTGGTAGGTTGCCGCAAGGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAAc < 1:874504/150‑1 (MQ=255) tCCGACAGCTCGGTATCCAAGTGTGCGATGGAGATTTCCAGCAGCGTGTTTTTTTCCGACTGGTTATTG‑AGCATATTG‑TCGATAAACAGGTAGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTaaaa > 2:1901370/1‑149 (MQ=255) cTCGGTATCCAAGTGTGCGATGGAGATTTCCACCAGCGTGTTTTTTTCCGACTGTTTATTG‑ATCATATTG‑TCGATAAACAGGTAGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAActgctgctg < 2:588975/150‑1 (MQ=255) cTCGGTATCAATGTGTGCGATGGTTATTTACAGCTTCGTTTTTTTTTCCGACTTTTTTTTT‑ATAATTTTG‑TCTATAAACTGTTTGGTTGCCGAAAGGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAActgctgctg < 2:1114151/150‑1 (MQ=255) gTATCCAAGTGTGCGATGGAGATTTCCAGCAGCGTGTTTTTTTCCGACTGTTTATTG‑ATCATATTG‑TCGATAAACAGGTAGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGtgtg > 2:1730272/1‑147 (MQ=255) gTATCCAAGTGTGCGATGGAGATTTCCAGCAGCGTGTTTTTTTCCGACTGTTTATTG‑ATCATATTG‑TCGATAAACAGGTAGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTg > 2:1043159/1‑150 (MQ=255) gTATCCAAGTGTGCGATGGAGATTTCCAGCAGCGTGTTTTTTTCCGACTGTTTATTG‑ATCATATTG‑TCGATAAACAGGTAGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTg > 2:1711181/1‑150 (MQ=255) gTATCCAAGTGTGCGATGGAGATTTCCAGCAGCGTGTTTTTTTCCGACTGTTTATTG‑ATCATATTG‑TCGATAAACAGGTAGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTg > 1:1453105/1‑150 (MQ=255) gTATCCAAGTGTGCGATGGAGATTTCCAGCAGCGTGTTTTTTTCCGACTGTTTATTG‑ATCATATTG‑TCGATAAACAGGTAGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTg > 2:1303729/1‑150 (MQ=255) gTATCCAAGTGTGCGATGGAGATTTCCAGCAGCGTGTTTTTTTCCGACTGTTTATTG‑ATCATATTG‑TCGATAAACAGGTAGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTg > 1:1605242/1‑150 (MQ=255) gTATCCAAGTGTGCGATGGAGATTTCCAGCAGCGTGTTTTTTTCCGACTGTTTATTG‑ATCATATTG‑TCGATAAACAGGTAGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTg > 1:950713/1‑150 (MQ=255) gTATCCAAGTGTGCGATGGAGATTTCCAGCAGCGTGTTTTTTTCCGACTGTTTATTG‑ATCATATTG‑TCGATAAACAGGTAGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTg > 2:330568/1‑150 (MQ=255) gTATCCAAGTGTGCGATGGAGATTTCCAGCAGCGTGTTTTTTTCCGACTGTTTATTG‑ATCATATTG‑TCGATAAACAGGTAGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTg > 2:875752/1‑150 (MQ=255) gTATCCAAGTGTGCGATGGAGATTTCCAGCAGCGTGTTTTTTTCCGACTGTTTATTG‑ATCATATTG‑TCGATAAACAGGTAGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTg > 1:10686/1‑150 (MQ=255) gTATCCAAGTGTGCGATGGAGATTTCCAGCAGCGTGTTTTTTTCCGACTGTTTATTG‑ATCATATTG‑TCGATAAACAGGTAGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTg > 2:715129/1‑150 (MQ=255) gTATCCAAGTGTGCGATGGAGATTTCCAGCAGCGTGTTTTTTTCCGACTGTTTATTG‑ATCATATTG‑TCGATAAACAGGTAGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTg > 1:621267/1‑150 (MQ=255) gTATCCAAGTGTGCGATGGAGATTTCCAGCAGCGTGTTTTTTTCCGACTGTTTATTG‑ATCATATTG‑TCGATAAACAGGTAGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTg > 2:680847/1‑150 (MQ=255) gTATCCAAGTGTGCGATGGAGATTTCCAGCAGCGTGTTTTTTTCCGACTGTTTATTG‑ATCATATTG‑TCGATAAACAGGTAGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTg > 2:416773/1‑150 (MQ=255) aTCCAAGTGTGCGATGGAGATTTCCAGCAGCGTGTTTTTTTCCGACTGTTTATTG‑ATCATATTG‑TCGATAAACAGGTAGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTGCGt > 2:1390795/1‑151 (MQ=255) aTCCAAGTGTGCGATGGAGATTTCCAGCAGCGTGTTTTTTTCCGACTGTTTATTG‑ATCATATTG‑TCGATAAACAGGTAGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTGCGt > 2:921540/1‑151 (MQ=255) aTCCAAGTGTGCGATGGAGATTTCCAGCAGCGTGTTTTTTTCCGACTGTTTATTG‑ATCATATTG‑TCGATAAACAGGTAGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTGCGt > 1:1026091/1‑151 (MQ=255) aTCCAAGTGTGCGATGGAGATTTCCAGCAGCGTGTTTTTTTCCGACTGTTTATTG‑ATCATATTG‑TCGATAAACAGGTAGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTGCGt > 1:668071/1‑151 (MQ=255) tgtgCGATTTAGATTTCCAGCAGCGTGTTTTTTTCCGACTGTTTATTG‑ATCATATTG‑TCTATAAACAGGAAGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTGCGTTTGTTc < 2:530988/150‑1 (MQ=255) tgCGATGGATTTTTCCAGCAGCGTTTTTTTTTCCGACTTTTTATTT‑ATAATTTTG‑TCGATAAACAGGTTGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTGCGTTTGTTCAtc < 1:911510/151‑1 (MQ=255) ctttGGATATTTCCAGCTGCTTGTTTTTTTCCGAATTTTTTTTT‑ATAATTTTG‑TCTATAAACTGGTTGGTTGCCGAAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTGCGTTTGTTCAtctc < 1:1479855/148‑1 (MQ=255) gagaTTTCCAGCAGCGTGTTTTTTTCCGACTGTTTATTG‑ATCATATTG‑TCGATAAACAGGTAGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTGCGTTTGTTCATCTCTTcc > 1:1282388/1‑150 (MQ=255) tgaTTTCCAGCTGGGTTTTTTTTTCCGACTTTTTATTT‑ATAATATTG‑TCTATAAACTGGTTGGTTGCCGCACCGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTGCGTTTGTTCATCTCTTccc < 1:715359/149‑1 (MQ=255) agaTTTCCCGCAGCGTTTTTTTTTCCGACTGTTTATTG‑ACCATTTTG‑TCGATAAACAGGTAGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTGCGTTTGTTCATCTCTTccc < 2:1272417/150‑1 (MQ=255) agaTTTCCAGCAGCGTGTTTTTTTCCGACTGTTTATTG‑ATCATATTG‑TCGATAAACAGGTAGGTTGCCGAAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTGCGTTTGTTCATCTCTTccc < 2:287726/150‑1 (MQ=255) agaTTTCAAGCAGCGTGTTTTTTTCCGACTGTTTATTG‑ATCATATTG‑TCGATAAACTGGTAGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTGCGTTTGTTCATCTCTTccc < 2:1026405/150‑1 (MQ=255) gaTTTCCAGCAGCGTGTTTTTTTCCGACTGTTTATTG‑ATCATATTG‑TCGATAAACAGGTAGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTGCGTTTGTTCATCTCTTcc > 1:766685/1‑148 (MQ=255) gaTTTCCAGCAGCGTGTTTTTTTCCGACTGTTTATTG‑ATCATATTG‑TCGATAAACAGGTAGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTGCGTTTGTTCATCTCTTcc > 1:1316077/1‑148 (MQ=255) aTTTCCAGCTGCGTGTTTTTTTCCGACTGTTTATTG‑ATCATATTG‑TCGATAAACAGGTAGGTTGCCGAAAGGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTGCGTTTGTTCATCTCTTCCCTGt < 2:1556172/151‑1 (MQ=255) aTTTCCAGCAGCGTGTTTTCTTCCGCCTGTTTATTG‑ATCATATTG‑TCGATAAACAGGTCGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTGCGTTTGTTCATCTCTTCCCTGt < 2:1716337/151‑1 (MQ=255) ttcatgctgcttttttttttCCTACTTTTTATTT‑ATCATTTTG‑TCGATAAACTGTTTGTTTGCCGAAAGGGGGGAAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTGCGTTTGTTCATCTCTTCCCTGTAg < 2:985552/138‑1 (MQ=255) ttCCAGCAGCGTGTTTTTTTCCGACTGTTTATTG‑ATCATATTG‑TCGATAAACAGGTAGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTGCGTTTGTTCATCTCTTCCCTGTAg > 1:290048/1‑151 (MQ=255) ctgctgcGTGTTTTTTTCCGACTTTTTTTTT‑ATCTTATTG‑TCTATAAACTGGTTGGTGGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTGCGTTTGTTCATCTCTTCCCTGTAgggg < 1:1463999/146‑1 (MQ=255) ctgcagcTTGTTTTTTTCCGACTGTTTATTT‑ATCATATTG‑TCTATAAACTGGTTGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTGCGTTTGTTCATCTCTTCCCTGTAgggg < 2:1310012/149‑1 (MQ=255) ctgcGTTTTTTTTTCCTACTGTTTATTT‑ATCATTTTG‑TCGATAAACTGGTTGGTTGCCGCACCGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTGCGTTTGTTCATCTCTTCCCTGTAgggg < 1:586889/146‑1 (MQ=255) ctgcGTTTTTTTTTCCGACTTTTTTTTG‑ATAATTTTT‑TCTATAAACTGGTTGGTGGCCGCAAGGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTGCGTTTGTTCATCTCTTCCCTGTAGGggagg < 1:1326803/149‑1 (MQ=255) cagggtgtTTTTTTCCGACTGTTTTTTG‑ATCATTTTG‑TCTATAATCTGGTTGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTGCGTTTGTTCATCTCTTCCCTGTAGGggag < 2:1873121/146‑1 (MQ=255) cagcGTGTTTTTTTCCTACTGTTTATTG‑ATAATATTG‑TCGATAAACAGGTAGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTGCGTTTGTTCATCTCTTCCCTGTAgggg < 2:1429080/148‑1 (MQ=255) cagcGTGTTTTTGTCCGACTTTTTATTG‑ATCATATGG‑TCGATAAACAGGTAGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTGCGTTTGTTCATCTCTTCCCTGTAGGggag < 2:853417/150‑1 (MQ=255) cagcGAGTTTTTTTGCGACTGTTTATTC‑CTCTTATTG‑TCGATAAACAGGTAGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTGCGTTTGTTCATCTCTTCCCTGTAGGggag < 2:1582854/150‑1 (MQ=255) gtgtTTTTTTCCGACTGTTTATTG‑ATCATATTG‑TCGATAAACAGGTAGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTGCGTTTGTTCATCTCTTCCCTGTAGGGGAGGAGGt > 2:591291/1‑151 (MQ=255) gtTTTTTTCCGACTGTTTATTG‑ATCATATTG‑TCGATAAACAGGTAGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTGCGTTTGTTCATCTCTTCCCTGTAGGGGAGGAGGttg > 1:589928/1‑151 (MQ=255) cTGTTTATTG‑ATCATATTG‑TCGATAAACAGGTAGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTGCGTTTGTTCATCTCTTCCCTGTAGGGGAGGAGGTTGATTTTGATTaaa > 1:685342/1‑151 (MQ=255) gTTTATTG‑ATCATATTG‑TCGATAAACAGGTAGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTGCGTTTGTTCATCTCTTCCCTGTAGGGGAGGAGGTTGATTTTGATTAAAtt > 2:769219/1‑151 (MQ=255) gTTTATTG‑ATCATATTG‑TCGATAAACAGGTAGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTGCGTTTGTTCATCTCTTCCCTGTAGGGGAGGAGGTTGATTTTGATTAAAtt > 2:347802/1‑151 (MQ=255) gTTTATTG‑ATCATATTG‑TCGATAAACAGGTAGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTGCGGTTGTTCATCTCTTCCCTGTAGGGGAGGAGGTTGATTTTGATTAAAtt > 1:1223275/1‑151 (MQ=255) aTCATATTG‑TCGATAAACAGGTAGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTGCGTTTGTTCATCTCTTCCCTGTAGGGGAGGAGGTTGATTTTGATTAAATTGTTCATaa > 2:1618125/1‑151 (MQ=255) tCATTTTG‑TCTATAAACTGGTAGGTTGCCGCACCGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTGCGTTTGTTCATCTCTTCCCTGTAGGGGAGGAGGTTGATTTTGATTAAATTGTTCATAAt < 1:162485/151‑1 (MQ=255) tCATATTT‑TCGATAAACAGGTAGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTGCGTTTGTTCATCTCTTCCCTGTAGGGGAGGAGGTTGATTTTGATTAAATTGTTCATAAt < 2:70459/151‑1 (MQ=255) tCATATTG‑TCTATAAACAGGTAGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTGCGTTTGTTCATCTCTTCCCTGTAGGGGAGGAGGTTGATTTTGATTAAATTGTTCATAAt < 2:1053476/151‑1 (MQ=255) tCATATTG‑TCGATAAACAGGTAGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTAc > 1:1828345/1‑65 (MQ=255) tCATAGTG‑TCGATAAACAGGTAGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTGCGTTTGTTCATCTCTTCCCTGTAGGGGAGGAGGTTGATTTTGATTAAATTGTTCATAAt < 2:1541685/151‑1 (MQ=255) taattttttCGATAAACTGTTTGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTGCGTTTGTTCATCTCTTCCCTGTAGGGGAGGAGGTTGATTTTGATTAAATTGTTCATAAt < 1:1341913/143‑1 (MQ=255) ttG‑TCTATAAACAGGTTGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTAGATCAGCGTTTTAAACTGCTGCTGTTTGCGTTTGTTCATCTCTTCCCTGTAGGGGAGGAGGTTGATTTTGATTAAATTGTTCATAATTATaa < 1:1895848/151‑1 (MQ=255) tctaTAAACTGGTTGGGTGCCGAAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTGCGTTTGTTCATCTCTTCCCTGTAGGGGAGGAGGTTGATTTTGATTAAATTGTTCATAATTATAATc < 1:646839/147‑1 (MQ=255) tCGATAAACAGGTAGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTGCGTTTGTTCATCTCTTCCCTGTAGGGGAGGAGGTTGATTTTGATTAAATTGTTCATAATTATAATc < 2:1262575/150‑1 (MQ=255) aTAAACAGGTAGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTGCGTTTGTTCATCTCTTCCCTGTAGGGGAGGAGGTTGATTTTGATTAAATTGTTCATAATTATAATCCCCg > 1:1660243/1‑151 (MQ=255) aaCAGTTAGGTTGCCGCACCGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTGCGTTTGTTCATCTCTTCCCTGTAGGGGAGGAGGTTGATTTTGATTAAATTGTTCATAATTATAATCCCCGTAc < 1:561267/151‑1 (MQ=255) aCAGGTAGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTGCGTTTGTTCATCTCTTCCCTGTAGGGGAGGAGGTTGATTTTGATTAAATTGTTCATAATTATAATCCCCGTAc > 1:1540490/1‑150 (MQ=255) cAGGTAGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTGCGTTTGTTCATCTCTTCCCTGTAGGGGAGGAGGTTGATTTTGATTAAATTGTTCATAATTATAATCCCCGTACCg > 2:1933588/1‑151 (MQ=255) cAGGTAGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTGCGTTTGTTCATCTCTTCCCTGTAGGGGAGGAGGTTGATTTTGATTAAATTGTTCATAATTATAATCCCCGTACCg > 2:423207/1‑151 (MQ=255) cAGGTAGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTGCGTTTGTTCATCTCTTCCCTGTAGGGGAGGAGGTTGATTTTGATTAAATTGTTCATAATTATAATCCCCGTACCg > 2:961697/1‑151 (MQ=255) cAGGTAGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTGCGTTTGTTCATCTCTTCCCTGTAGGGGAGGAGGTTGATTTTGATTAAATTGTTCATAATTATAATCCCCGTACCg > 1:891756/1‑151 (MQ=255) cAGGTAGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTGCGTTTGTTCATCTCTTCCCTGTAGGGGAGGAGGTTGATTTTGATTAAATTGTTCATAATTATAATCCCCGTACCg > 2:423229/1‑151 (MQ=255) | CTCCTCGATTTTGTTTTTCTTAATCAGGAAGGCATCTTTTTCCTGTTTGAGCTTTTGTATTTCCGACAGCTCGGTATCCAAGTGTGCGATGGAGATTTCCAGCAGCGTGTTTTTTTCCGACTGTTTATTG‑ATCATATTG‑TCGATAAACAGGTAGGTTGCCGCAACGGCGGCAACGCCCGTCAGCACGGCGCCGTACATCAGCGTTTTAAACTGCTGCTGTTTGCGTTTGTTCATCTCTTCCCTGTAGGGGAGGAGGTTGATTTTGATTAAATTGTTCATAATTATAATCCCCGTACCG > Exported/106908‑107205 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |