| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | Exported | 1,887,941 | 0 | C | A | 32.7% | 515.3 / inf | 337 | intergenic (‑324/+257) | BCHEFKBB_01931/BCHEFKBB_01932 | GIY‑YIG nuclease [NGO_1911]/pilus assembly protein [NGO_10270] |
| Reads supporting (aligned to +/- strand): ref base C (74/152); new base A (26/84); total (100/237) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.88e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 346 total aligned reads displayed.
CGCACCGACAGACCCGGATTCCCGCCTGAGCGGGAATGACGGCGGAGCGGTTTCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAATGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGATAATCTTTGAATATTGCTGTTGTCCCACGTCCTAGATTCCCGCCTGCG > Exported/1887791‑1888091 | cGCACCGACAGACCCGGATTCCCGCCTGAGCGGGAATGACGGCGGAGCGGTTTCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGAc < 2:20745/151‑1 (MQ=255)cGCACCGACAGACCCGGATTCCCGCCTGAGCGGGAATGACGGCGGAGCGGTTTCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGAc < 2:154302/151‑1 (MQ=255) cGACAGACCCGGATTCCCGCCTGAGCGGGAATGACGGCGGAGCGGTTTCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAATgg < 2:191591/151‑1 (MQ=255) cGACAGACCCGGATTCCCGCCTGAGCGGGAATGACGGCGGAGCGGTTTCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAATgg < 1:1651825/151‑1 (MQ=255) aCAGACCCGGATTCCCGCCTGAGCGGGAATGACGGCGGAGCGGTTTCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTACACGACAATGGGa > 2:652125/1‑151 (MQ=255) aCAGACCCGGATTCCCGCCTGAGCGGGAATGACGGCGGAGCGGTTTCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAAACTAAAATAACGTCATTTACACGACAATGGGa > 2:160979/1‑151 (MQ=18) aCCCGGATTCCCGCCTGAGCGGGAATGACGGCGGAGCGGTTTCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAATGGGAATcc < 1:667563/151‑1 (MQ=255) tctagtgccccGCCGGCGCGGGAATGACGGCGGAGCGGTTTCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTCCCACGAAAGTGGGAATcc < 2:1557868/142‑1 (MQ=17) tcaagatccccGCCTGGGGGGTAATCACGGCGGAGCGGTTTCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTCCCACGAAAGTGGGAATcc < 1:374509/142‑1 (MQ=17) cccGGATTCCCGCCTGAGCGGGAATGACGGCGGAGCGGTTTCTGTTTTTTCCGATAAATTCCGAAAACTCAAAATTTCATCAATCCTACAAAAACAGAAAACCAAAATCAGAAACCAAAAATACCGTCATTTCCACGACAAAGGGAATCCg > 1:184149/1‑151 (MQ=21) tataTTCCCGCCTCCGCGTTAATGAAGGCGGAGATTTTTCTGTTTTTTCCTATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTCACACGAAAGTGGGAATCCGgt < 2:36346/148‑1 (MQ=17) aTTCCCGCCTGCGCGGGAATGACGGCGGAGCGGTTTCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTCCCACGAAAGTGGGAATCCGgttc < 2:1477598/150‑1 (MQ=17) aTTCCCGCCTGAGCGGGAATGACGGCGGAGCGTTTTCTGAATTTTCCGATAAAATCCTAAAAATCAAAAGATCATAAATCCTACAAAAACAGAAAACAAAAATCCGAAACCAAAAATCACGTCATTTACACGACAATGGGAATCAGgttag > 2:467684/1‑149 (MQ=16) aTTCCCGCCTGAGCGGGAATGACGGCGGAGCGGTTTCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATGTCATCATTCCGACAAAAACAGAAAACCAAAATCAGTAACCTAAAATCCCGTCAGTTCCACGACACTGGGAATCCGgtgcg > 1:1032311/1‑148 (MQ=18) ccGCCTGAGCGGGAATGACGGCGGAGCGGTTTCTGTTTTTTCCGATAAATTCCTAAAACTAAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATACCGTCATTTCCACGACAATGGGAATCCGGttcgttcg > 1:1116973/1‑151 (MQ=255) cTGAGCGGGAATGACGGCGGAGCGGTTTCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAATGGGAATCCGGTTCGTTCGGttt < 1:1724344/151‑1 (MQ=255) cTGAGCGGGAATGACGGCGGAGCGGTTTCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAATGGGAATCCGGTTCGTTCGGttt < 2:635820/151‑1 (MQ=255) cTGAGCGGGAATGACGGCGGAGCGGTTTCTGTCTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAATGGGAATCCGGTTCGTTCGGttt < 1:1222051/151‑1 (MQ=255) gAGCGGGAATGACGGCGGAGCGGTTTCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAATGGGAATCCGGTTCGTTCGGTTTCg > 2:218740/1‑151 (MQ=255) ggAATGACGGCGGAGCGGTTTCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATACCGTCATTCCCACGAAAGTGGGAATCCGGTTCGTTCGGTTTCGCTTGt > 1:1496770/1‑151 (MQ=18) ggAATGACGGCGGAGCGGTTTCTGTTTTTTCCGATAAATTACAAAAAATCAAAATTTGATAATTACTAAAAAAAAATAAAAACAAAAAAAGAAAACAAAAATCCCGTCATTTACACGACAATTGGAATACGgttcggtggggttagcgtgt > 1:1949678/1‑136 (MQ=12) gAATGACGGCGGAGCGGTTTCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTCCCACGAAAGTGGGAATCCGGTTCGTTCGGTTTCGCTTGtt > 2:423631/1‑151 (MQ=255) aCGGCGGAGCGGTTTCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTCCCACGAAAGTGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAg < 1:307879/151‑1 (MQ=255) cggcggAGCGGTTTCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAATGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTaatt > 2:776509/1‑149 (MQ=255) cggcggAGCGGTTTCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAATGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGt < 2:1271447/151‑1 (MQ=255) cggcggAGCGGTTTCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTCCCACGAAAGTGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGt < 1:541330/151‑1 (MQ=255) cggcggAGCGGTTTCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTCCCACGAAAGTGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGt < 1:1310848/151‑1 (MQ=255) cggcggAGCGGTTTCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTCCCACGAAAGTGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGt < 1:1523733/151‑1 (MQ=255) gcggAGCGGTGTCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATACCGTCATTTACACGACAATGGGAATCCGGTTCGTTAGGTTTCGCTTGTTTTAAGttt > 2:739403/1‑151 (MQ=25) ggAGCGGTTTCTGTTTTTTCCGATAAATTCCTCAAACTCAAAAGTTCATCCTTCCTACAAAAACAGAAAAACAAATTCAGAAACCTAAAATCCCGTCATTTCCACGACCAGGGGAATCCGGTGCGGTCGGTTTGGCtgggtttaggtgtcg > 2:1881582/1‑137 (MQ=18) cGGTTTCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTCCCACGAACGTGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGt < 1:1886407/150‑1 (MQ=25) tttCTGTTTTTTCCGATACATTCCTAAAACTCAAAAGTACATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTACAATCCCGTCATTCCCACGAAAGTGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAAc < 2:1336927/150‑1 (MQ=25) tCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAATGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTc < 1:460817/151‑1 (MQ=255) tCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTCCCACGAAAGTGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTc < 1:889642/151‑1 (MQ=255) gTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAATGGGAATCCGGTTCGTTCGCTTTCGCTTGTTTTAAGTTTCGGGTAACtacct > 2:908694/1‑146 (MQ=255) gTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTCCCACGAAAGTGGGAATCCGGGTCTTTCGCTTACGCTAGTGTTCAGTGTCGGGTAAcgacca > 2:602026/1‑145 (MQ=18) ttttttCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAATGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCAc < 1:983262/150‑1 (MQ=255) ttttttCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTCCCACGAAAGTGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCAc < 2:462393/150‑1 (MQ=255) tttttCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAATGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACtt < 1:746292/151‑1 (MQ=255) tttttCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTCCCACGAAAGTGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACtt < 2:328542/151‑1 (MQ=255) tttttCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTCCCACGAAAGTGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACtt < 1:1085716/151‑1 (MQ=255) tttttCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATAAGAAACCTAAAATCCCGTCATTTCCACGACAATGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACtt < 1:637269/151‑1 (MQ=255) tttttCCGATAAATTCCTAAAACTCAAAATTACATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAATGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACtt < 2:594990/151‑1 (MQ=255) tCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAATGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTc < 1:1849707/151‑1 (MQ=255) aTAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAATGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCAtt > 1:626020/1‑150 (MQ=255) tAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTCCCACGAAAGTGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTcc < 1:1664292/151‑1 (MQ=255) tAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTCCCACGAAAGTGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTcc < 2:269899/151‑1 (MQ=255) tAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTCCCACGAAAGTGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTcc < 1:1748906/151‑1 (MQ=255) tCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGACACCTAAAATCCCGTCATTCCCACGAAAGTGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTcccgcgc < 2:666379/151‑5 (MQ=25) tCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAATGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGa > 2:503643/1‑151 (MQ=255) tacaaCTCAAAATTTCATCAGTCCTACAAAAACAGAAAACCAAAATCAGAACCCTAAAATCCCGTCATTTCCACGACAATGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAg < 2:791053/148‑1 (MQ=255) tAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAATGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAg < 1:1453231/151‑1 (MQ=255) aCTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAATGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTggg < 2:1293086/151‑1 (MQ=255) cTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAATGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGa > 1:625018/1‑151 (MQ=255) cTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTCCCACGAAAGTGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTcccgcgcaggcggga > 1:1955361/1‑139 (MQ=25) cAAAATTTCATCATTCATACAAAAACAGAAAACCAAAATCCGAACCCTAAAATCCCGTCATTCCCACGAAAGTGGGAATCCGGTTCTTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTACCACTTCGTCATTcccgcgcaggcgggaat < 2:1026562/151‑15 (MQ=21) aaaaTTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTCCCACGAAAGTGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTACCACTTCGTCATTcccgcgcaggcgggaatc < 2:1004300/151‑16 (MQ=21) aaaTTTCATCATTCCTACACAAACAGAAAACCAAAAACAGAAACCTAAAATCCCGTCATTCCCACGAAAGTGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCGCGCAGGCGGGAATcc < 2:1685743/151‑1 (MQ=21) aaaTTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAATGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATc > 1:1820340/1‑150 (MQ=255) aaaTTTCATCAGTCCTACAACAACAGAAAACCAAAATCCGAAACCTAAAACCCCGTCAGTCCCACGACAGTGGGAATCCGGTTCTTTCGGTTTCGCTTGATTTAACTCTCGGGTAACTTCCACTTCGTCATTCCCGCGCAGGCGGGAATcc < 2:55181/151‑1 (MQ=255) aaaTTACATAATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAACTCCCGTCATTCCCACGAATGTGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCGCGCAGGCGGGAATcc < 1:712864/151‑1 (MQ=21) tcatcaTTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAATGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAAt > 1:940203/1‑151 (MQ=255) tcatcaTTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAATGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAAt < 1:1808983/151‑1 (MQ=255) catcatTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAATGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATc < 1:784076/151‑1 (MQ=255) aatTCCTACAAAAAAATAAAACCAAAATCATAAACCTAAAAACCCGTCATACCCACGAATGTGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTATGTTTCGGGTAACTTCCACTTCGTCATTCCCGCGCAGGCGGGAATccggtgcgttg < 1:1376128/150‑10 (MQ=16) atTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTCCCACGAAAGTGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCGCGCAGGCGGGAATccggtgcggtga > 1:804937/1‑141 (MQ=21) tCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAATGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCGAGAATCCCGGAc < 2:826687/151‑1 (MQ=255) tCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAATGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGAc < 1:1712042/151‑1 (MQ=255) tCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAATGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGAc < 1:996129/151‑1 (MQ=255) cTACAAAAACAGAAAACCAACATCACAAACCTAAACACCCGTCATTCCCACGACAGTGGGAATCCGGTTCTTTCGGTTTCGCTTGTTTTTAGTTTCGGGTAACTTCCACTTCGTCATTCCCGCGCAGGCGGGAATccggtgcgttgagttt < 2:692939/151‑15 (MQ=19) aaaCAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAATGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGAt < 1:843012/151‑1 (MQ=255) ccAAAATCAGAAACCTAAAATCCCGTCATTCCCACGAAAGTGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTcc < 2:358634/104‑1 (MQ=25) cAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAATGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGATAATCTTTGAat < 2:222038/151‑1 (MQ=255) cAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAATGGGAATCCGGTTCGGTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGATAATCTTTGAat < 2:953485/151‑1 (MQ=255) cAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAATGGGAATACGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGACATTCCCACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGATAATCTTTGAat < 2:1579712/151‑1 (MQ=255) cAAAATCAGAAACCTAAAAGCCCGTCATTTCCACGACAATGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGATAATCTTTGAat < 1:1302000/151‑1 (MQ=255) tCAGAAACCTAAAATCCCGTCATTTCCACGACAATGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGATAATCTTTGAATATTGc < 1:100130/151‑1 (MQ=255) aaaCCTACAATCCCGTCATTTCCACGACAATGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGATAATCTTTGAATATTGCtg < 2:1204093/149‑1 (MQ=255) aaaCCTAAAATCCCGTCATTTCCACGACAATGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGATAATCTTTGAATATTGCtg < 1:61967/149‑1 (MQ=255) aaaCCTAAAATCCCGTCATTTCCACGACAATGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGATAATCTTTGAATATTGCtg < 2:1118230/149‑1 (MQ=255) ccTAAAATCCCGTCATTTCCACGACAATGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGATAATCTTTGAATATTGCtgttgt > 2:1138566/1‑150 (MQ=255) ccTAAAATCCCGTCATTTCCACGACAATGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGATAATCTTTGAATATTGCtgttgt > 2:1272902/1‑150 (MQ=255) ccTAAAATCCCGTCATTTCCACGACAATGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGATAATCTTTGAATATTGCtgttgt > 2:339572/1‑150 (MQ=255) ccTAAAATCCCGTCATTTCCACGACAATGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGATAATCTTTGAATATTGCTGTTGTc < 1:10530/151‑1 (MQ=255) ccTAAAATCCCGTCATTTCCACGACAATGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGATAATCTTTGAATATTGCTGTTGTc < 1:1273334/151‑1 (MQ=255) ccTAAAATCCCGTCATTTCCACGACAATGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGATAATCTGTGAATATTGCtgttgt > 1:157671/1‑150 (MQ=255) cTAAAATCCCGTCATTTCCACGACAATGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGATAATCTTTGAATATTGCTGTTGTcc < 1:1686133/151‑1 (MQ=255) cGTCATTTCCACGACAATGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGATAATCTTTGAATATTGCtg < 2:1836501/136‑1 (MQ=255) gTCATTTCCACGACAATGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGATAATCTTTGAATATTGCTGTTGTCCCACGTCCTat > 2:406897/1‑150 (MQ=255) aTTTCCACGACAATGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGATAATCTTTGAATATTGCTGTTGTCCCACGTCCTAGAtt < 2:1717408/151‑1 (MQ=255) ccACGACAATGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGATAATCTTTGAATATTGCTGTTGTCCCACGTCCTAGATTCCCg < 2:1483007/151‑1 (MQ=255) ccACGAAAGTGGGAATCGGGTTCGTTCGGTTTCGATTGTTTTATGTTTCGGGTAACTTCCACTTCGTCAGTCCCGCGCAGGCGGGAATCCggtgcgttgagtttcagctatttagaataacttttgaaactctaatcccgtcattcccacg > 2:531880‑M2/1‑90 (MQ=255) ccGACAATGGGAATCCCGGTCGTTCGGTGTCGCTTGTTTTAAGCTTCCGGTCACTTCCACTTCCTCATTCCCACGAAACAGGGAATCCAGAATCCCGGACTTTCAGAAGAACTTCCACTATTGCTGTAGTCCCACCTCCAAGACTCCCGcc < 2:180943/150‑1 (MQ=255) aCGACAATGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCTACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGATAATCTTTGAATATTGCTGTTGTCCCACGTCCTAGATTCCCGcc < 2:10725/151‑1 (MQ=255) aCGACAATGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGATAATCTTTGAATATTGCTGTTGTCCCACGTCCTAGATTCCCGcc < 1:835654/151‑1 (MQ=255) aCGACAATGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGATAATCTTTGAATATTGCTGTTGTCCCACGTCCTAGATTCCCGcc < 1:432558/151‑1 (MQ=255) aCGACAATGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGATAATCTTTGAATATTGCTGTTGTCCCACGTCCTAGATTCCCGcc < 2:165803/151‑1 (MQ=255) aCGACAATGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGATAATCTTTGAATATTGCTGTTGTCCCACGTCCTAGATTCCCGcc < 2:1447879/151‑1 (MQ=255) cGACAATGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAATTTTCGGGTAACTTCCACTTAGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGATAATCTTTGAATATTGCGGTTGTCCCACGTCCTAGATTCCCGc > 1:270067/1‑149 (MQ=255) cGACAATGGGAATCCGGTTCGTTCGGTTTCGCTAGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAAACCAGAATCCCGGACTTTCAGATAATCTTTGAATATTGCTGTTGTCCCACGTCCTAGATTCCCGc > 2:1938922/1‑149 (MQ=255) | CGCACCGACAGACCCGGATTCCCGCCTGAGCGGGAATGACGGCGGAGCGGTTTCTGTTTTTTCCGATAAATTCCTAAAACTCAAAATTTCATCATTCCTACAAAAACAGAAAACCAAAATCAGAAACCTAAAATCCCGTCATTTCCACGACAATGGGAATCCGGTTCGTTCGGTTTCGCTTGTTTTAAGTTTCGGGTAACTTCCACTTCGTCATTCCCACGAAAGTGGGAATCCAGAATCCCGGACTTTCAGATAATCTTTGAATATTGCTGTTGTCCCACGTCCTAGATTCCCGCCTGCG > Exported/1887791‑1888091 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |